Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RNU7-43P-201ENST00000516554 64 ntBASIC1.15□□□□□ -2.23
CLDN1O95832 RN7SL793P-201ENST00000583259 296 ntBASIC1.15□□□□□ -2.23
CLDN1O95832 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CLDN1O95832 AC015726.2-201ENST00000620112 122 ntBASIC1.15□□□□□ -2.23
CLDN1O95832 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.15□□□□□ -2.23
CLDN1O95832 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.15□□□□□ -2.23
CLDN1O95832 Y_RNA.441-201ENST00000384123 112 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 RNY1P4-201ENST00000384595 115 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 RNU6-907P-201ENST00000390924 102 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 PCNPP3-201ENST00000393579 471 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 SNORA79-201ENST00000408376 140 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 RNU5E-9P-201ENST00000411164 104 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 AC087499.4-201ENST00000448505 178 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 RNU2-13P-201ENST00000515909 113 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 SNORD111.1-201ENST00000516421 86 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 RNU6-182P-201ENST00000516970 105 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 AL121890.5-201ENST00000620848 304 ntBASIC1.14□□□□□ -2.23
CLDN1O95832 SNORD115-28-201ENST00000363931 81 ntBASIC1.13□□□□□ -2.23
CLDN1O95832 SNORD26-201ENST00000384147 75 ntBASIC1.13□□□□□ -2.23
CLDN1O95832 Y_RNA.542-201ENST00000384641 111 ntBASIC1.13□□□□□ -2.23
CLDN1O95832 MIR150-201ENST00000385048 84 ntBASIC1.13□□□□□ -2.23
CLDN1O95832 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CLDN1O95832 U8.17-201ENST00000391292 132 ntBASIC1.13□□□□□ -2.23
CLDN1O95832 RNU6-938P-201ENST00000411285 103 ntBASIC1.13□□□□□ -2.23
CLDN1O95832 RNU6-693P-201ENST00000516134 107 ntBASIC1.13□□□□□ -2.23
CLDN1O95832 RNU6-861P-201ENST00000516745 106 ntBASIC1.13□□□□□ -2.23
CLDN1O95832 SNORA18.7-201ENST00000516910 131 ntBASIC1.13□□□□□ -2.23
CLDN1O95832 MIR378D2-201ENST00000580636 98 ntBASIC1.13□□□□□ -2.23
CLDN1O95832 AC098479.1-201ENST00000609225 154 ntBASIC1.13□□□□□ -2.23
CLDN1O95832 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.13□□□□□ -2.23
CLDN1O95832 Y_RNA.37-201ENST00000362606 108 ntBASIC1.12□□□□□ -2.23
CLDN1O95832 RNU4-84P-201ENST00000364200 139 ntBASIC1.12□□□□□ -2.23
CLDN1O95832 RNU6-597P-201ENST00000365620 102 ntBASIC1.12□□□□□ -2.23
CLDN1O95832 SNORA24-201ENST00000384096 131 ntBASIC1.12□□□□□ -2.23
CLDN1O95832 MTND5P15-201ENST00000434246 349 ntBASIC1.12□□□□□ -2.23
CLDN1O95832 RNU6-1270P-201ENST00000517128 108 ntBASIC1.12□□□□□ -2.23
CLDN1O95832 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.12□□□□□ -2.23
CLDN1O95832 AL096861.1-201ENST00000610899 123 ntBASIC1.12□□□□□ -2.23
CLDN1O95832 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CLDN1O95832 SNORD115-34-201ENST00000362441 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-12-201ENST00000362583 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-29-201ENST00000362834 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-9-201ENST00000362912 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-21-201ENST00000362963 81 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-14-201ENST00000363090 81 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-13-201ENST00000363358 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-41-201ENST00000363608 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-11-201ENST00000363616 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-5-201ENST00000363633 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-39-201ENST00000363694 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-4-201ENST00000363810 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-16-201ENST00000363887 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-6-201ENST00000363942 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-42-201ENST00000364273 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-15-201ENST00000364809 81 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-1-201ENST00000364961 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-26-201ENST00000365067 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-10-201ENST00000365073 81 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-43-201ENST00000365503 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-36-201ENST00000365629 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 RNU6-1292P-201ENST00000383856 107 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 Y_RNA.410-201ENST00000383992 113 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 Y_RNA.555-201ENST00000384673 110 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 MIR758-201ENST00000390227 88 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD28B-201ENST00000390993 75 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 RNU6-1135P-201ENST00000411083 103 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 RNU6-1054P-201ENST00000411293 104 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.11□□□□□ -2.23
CLDN1O95832 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.11□□□□□ -2.23
CLDN1O95832 SEPT7P4-201ENST00000437076 306 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 snoU13.25-201ENST00000458945 104 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 AC107027.2-201ENST00000512197 115 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD116-25-201ENST00000516517 92 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 RNU7-121P-201ENST00000516604 62 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 MIR4764-201ENST00000580680 88 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 MIR3668-201ENST00000582138 75 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 MIR548AR-201ENST00000582191 57 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORD115-40-201ENST00000606510 82 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 AC134878.1-201ENST00000619901 243 ntBASIC1.11□□□□□ -2.23
CLDN1O95832 SNORA1.2-201ENST00000365189 134 ntBASIC1.1□□□□□ -2.23
CLDN1O95832 SNORA1-201ENST00000384107 130 ntBASIC1.1□□□□□ -2.23
CLDN1O95832 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.1□□□□□ -2.23
CLDN1O95832 AF228730.3-201ENST00000436691 102 ntBASIC1.1□□□□□ -2.23
CLDN1O95832 Y_RNA.662-201ENST00000516028 97 ntBASIC1.1□□□□□ -2.23
CLDN1O95832 RNU7-181P-201ENST00000517234 74 ntBASIC1.1□□□□□ -2.23
CLDN1O95832 AP003716.2-201ENST00000528260 108 ntBASIC1.1□□□□□ -2.23
CLDN1O95832 MIR5000-201ENST00000577717 103 ntBASIC1.1□□□□□ -2.23
CLDN1O95832 MIR3192-201ENST00000584920 77 ntBASIC1.1□□□□□ -2.23
CLDN1O95832 AC008133.2-201ENST00000624540 351 ntBASIC1.1□□□□□ -2.23
CLDN1O95832 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CLDN1O95832 RNA5SP48-201ENST00000363969 126 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 RNU6-886P-201ENST00000384319 105 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 Y_RNA.537-201ENST00000384626 109 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 MIR216A-201ENST00000385063 110 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 MIR624-201ENST00000385217 97 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 RNU6-239P-201ENST00000390990 99 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 SNORD77.3-201ENST00000391113 65 ntBASIC1.09□□□□□ -2.23
CLDN1O95832 RNU7-41P-201ENST00000515917 61 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 330.3 ms