Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 RNU6-710P-201ENST00000410424 105 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 SNORD12B-201ENST00000410433 91 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 RNA5SP401-201ENST00000515920 127 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.64□□□□□ -2.67
SIX6O95475 MIR3920-201ENST00000581751 86 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 MIR548AY-201ENST00000617669 107 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 AC007494.3-201ENST00000624660 743 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 MIR599-201ENST00000385069 95 ntBASIC-1.65□□□□□ -2.67
SIX6O95475 RNA5SP266-201ENST00000410273 108 ntBASIC-1.65□□□□□ -2.67
SIX6O95475 MTND3P7-201ENST00000474435 343 ntBASIC-1.65□□□□□ -2.67
SIX6O95475 RNU6-155P-201ENST00000516347 100 ntBASIC-1.65□□□□□ -2.67
SIX6O95475 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.65□□□□□ -2.67
SIX6O95475 MIR5704-201ENST00000584029 77 ntBASIC-1.65□□□□□ -2.67
SIX6O95475 U6.109-201ENST00000636749 87 ntBASIC-1.65□□□□□ -2.67
SIX6O95475 MIR302B-201ENST00000362188 73 ntBASIC-1.66□□□□□ -2.68
SIX6O95475 MIR342-201ENST00000362212 99 ntBASIC-1.66□□□□□ -2.68
SIX6O95475 RNU6-961P-201ENST00000363893 105 ntBASIC-1.66□□□□□ -2.68
SIX6O95475 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.66□□□□□ -2.68
SIX6O95475 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.66□□□□□ -2.68
SIX6O95475 AC026421.1-201ENST00000519101 163 ntBASIC-1.66□□□□□ -2.68
SIX6O95475 ELOCP32-201ENST00000548625 324 ntBASIC-1.66□□□□□ -2.68
SIX6O95475 AC060780.3-201ENST00000589464 80 ntBASIC-1.66□□□□□ -2.68
SIX6O95475 AL080274.1-201ENST00000605565 220 ntBASIC-1.66□□□□□ -2.68
SIX6O95475 AC011603.4-201ENST00000611325 277 ntBASIC-1.66□□□□□ -2.68
SIX6O95475 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.66□□□□□ -2.68
SIX6O95475 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.67□□□□□ -2.68
SIX6O95475 SNORD74.6-201ENST00000364796 70 ntBASIC-1.67□□□□□ -2.68
SIX6O95475 RNU6-449P-201ENST00000383914 107 ntBASIC-1.67□□□□□ -2.68
SIX6O95475 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.67□□□□□ -2.68
SIX6O95475 RNU6-297P-201ENST00000384636 107 ntBASIC-1.67□□□□□ -2.68
SIX6O95475 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.67□□□□□ -2.68
SIX6O95475 MTND3P8-201ENST00000412909 339 ntBASIC-1.67□□□□□ -2.68
SIX6O95475 HAR1A.1-201ENST00000459583 118 ntBASIC-1.67□□□□□ -2.68
SIX6O95475 RNA5SP461-201ENST00000516451 104 ntBASIC-1.67□□□□□ -2.68
SIX6O95475 AC138207.3-201ENST00000585289 166 ntBASIC-1.67□□□□□ -2.68
SIX6O95475 MIR20A-201ENST00000362279 71 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 SNORD113-6-201ENST00000363345 75 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 SNORD115-35-201ENST00000365122 82 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 RNU4-20P-201ENST00000365601 151 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 SNORA18-201ENST00000384416 132 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 SNORA49-201ENST00000386157 136 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 RNU7-13P-201ENST00000516413 62 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 RNU2-31P-201ENST00000516954 155 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 RNU7-10P-201ENST00000607194 63 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 AL021368.1-201ENST00000607490 540 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 MIR8068-201ENST00000618032 68 ntBASIC-1.68□□□□□ -2.68
SIX6O95475 RNU6-254P-201ENST00000363377 107 ntBASIC-1.69□□□□□ -2.68
SIX6O95475 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.69□□□□□ -2.68
SIX6O95475 SNORA72.3-201ENST00000365074 132 ntBASIC-1.69□□□□□ -2.68
SIX6O95475 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.69□□□□□ -2.68
SIX6O95475 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.69□□□□□ -2.68
SIX6O95475 RNU7-149P-201ENST00000516739 59 ntBASIC-1.69□□□□□ -2.68
SIX6O95475 SNORA40.17-201ENST00000517256 115 ntBASIC-1.69□□□□□ -2.68
SIX6O95475 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.69□□□□□ -2.68
SIX6O95475 AC022140.2-201ENST00000623500 188 ntBASIC-1.69□□□□□ -2.68
SIX6O95475 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.7□□□□□ -2.68
SIX6O95475 RNU6-973P-201ENST00000364690 107 ntBASIC-1.7□□□□□ -2.68
SIX6O95475 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.7□□□□□ -2.68
SIX6O95475 RNU6-596P-201ENST00000365395 98 ntBASIC-1.7□□□□□ -2.68
SIX6O95475 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.7□□□□□ -2.68
SIX6O95475 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.7□□□□□ -2.68
SIX6O95475 AL590004.1-201ENST00000405321 300 ntBASIC-1.7□□□□□ -2.68
SIX6O95475 AC097635.1-201ENST00000450678 155 ntBASIC-1.7□□□□□ -2.68
SIX6O95475 SNORD42A-201ENST00000459584 64 ntBASIC-1.7□□□□□ -2.68
SIX6O95475 RNU6-470P-201ENST00000515954 104 ntBASIC-1.7□□□□□ -2.68
SIX6O95475 snoU83B.1-201ENST00000517136 88 ntBASIC-1.7□□□□□ -2.68
SIX6O95475 MTND5P40-201ENST00000559945 246 ntBASIC-1.7□□□□□ -2.68
SIX6O95475 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 RNU6-831P-201ENST00000384548 107 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 AC093423.1-201ENST00000440817 142 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 MTND1P27-201ENST00000451117 902 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 AC023449.1-201ENST00000454464 154 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 snoU109.3-201ENST00000459477 145 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 SERF1AP1-201ENST00000514575 187 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 RNU6-693P-201ENST00000516134 107 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.71□□□□□ -2.68
SIX6O95475 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 U4.1-201ENST00000620349 87 ntBASIC-1.71□□□□□ -2.68
SIX6O95475 SNORD115-25-201ENST00000362619 82 ntBASIC-1.72□□□□□ -2.68
SIX6O95475 RNY1P2-201ENST00000364820 117 ntBASIC-1.72□□□□□ -2.68
SIX6O95475 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.72□□□□□ -2.68
SIX6O95475 SNORA36B-201ENST00000410438 131 ntBASIC-1.72□□□□□ -2.68
SIX6O95475 RNU6-248P-201ENST00000410720 107 ntBASIC-1.72□□□□□ -2.68
SIX6O95475 AF228730.4-201ENST00000421457 183 ntBASIC-1.72□□□□□ -2.68
SIX6O95475 AC083904.1-201ENST00000487828 231 ntBASIC-1.72□□□□□ -2.68
SIX6O95475 MIR3913-1-201ENST00000577744 102 ntBASIC-1.72□□□□□ -2.68
SIX6O95475 AC079248.2-201ENST00000623779 326 ntBASIC-1.72□□□□□ -2.68
SIX6O95475 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.72□□□□□ -2.68
SIX6O95475 RNU6-874P-201ENST00000362390 105 ntBASIC-1.73□□□□□ -2.69
SIX6O95475 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.73□□□□□ -2.69
SIX6O95475 MIR548A2-201ENST00000384956 97 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms