Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SNORA31.17-201ENST00000516953 127 ntBASIC1.92□□□□□ -2.1
CDKL5O76039 AC015712.3-201ENST00000559380 164 ntBASIC1.92□□□□□ -2.1
CDKL5O76039 AL670379.3-201ENST00000605040 251 ntBASIC1.92□□□□□ -2.1
CDKL5O76039 SNORA63.4-201ENST00000362763 126 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 Y_RNA.494-201ENST00000384432 111 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 AL627390.1-201ENST00000396055 340 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 RPL23AP6-201ENST00000446637 472 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 RPS26P48-201ENST00000491713 339 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 RNU6-830P-201ENST00000516353 107 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 RNU6-589P-201ENST00000516485 107 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 RNU7-181P-201ENST00000517234 74 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 MIR4778-201ENST00000577635 80 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 MIR4769-201ENST00000584126 77 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 AL137067.1-201ENST00000615933 120 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 U1.36-201ENST00000620684 176 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 MTND5P18-201ENST00000445624 1801 ntBASIC1.91□□□□□ -2.1
CDKL5O76039 RNU6-349P-201ENST00000362402 107 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 Y_RNA.346-201ENST00000365385 112 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 Y_RNA.351-201ENST00000365436 96 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 MIR548A3-201ENST00000385297 97 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 PGBD4P5-201ENST00000445958 426 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 RNU6-237P-201ENST00000515985 71 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 SNORA25.15-201ENST00000516487 89 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 RNA5SP481-201ENST00000516814 122 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 Y_RNA.709-201ENST00000516952 92 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 AL121890.5-201ENST00000620848 304 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 AL513423.1-201ENST00000621695 132 ntBASIC1.9□□□□□ -2.11
CDKL5O76039 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CDKL5O76039 Y_RNA.35-201ENST00000362601 101 ntBASIC1.89□□□□□ -2.11
CDKL5O76039 Y_RNA.241-201ENST00000364470 117 ntBASIC1.89□□□□□ -2.11
CDKL5O76039 RNU1-133P-201ENST00000364867 167 ntBASIC1.89□□□□□ -2.11
CDKL5O76039 RNU6-690P-201ENST00000365242 106 ntBASIC1.89□□□□□ -2.11
CDKL5O76039 MIR526A1-201ENST00000384897 85 ntBASIC1.89□□□□□ -2.11
CDKL5O76039 MIR548A1-201ENST00000385041 97 ntBASIC1.89□□□□□ -2.11
CDKL5O76039 MIR660-201ENST00000385235 97 ntBASIC1.89□□□□□ -2.11
CDKL5O76039 SNX2P2-201ENST00000424553 323 ntBASIC1.89□□□□□ -2.11
CDKL5O76039 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.89□□□□□ -2.11
CDKL5O76039 AC090821.2-201ENST00000523552 176 ntBASIC1.89□□□□□ -2.11
CDKL5O76039 AC091932.4-201ENST00000623386 200 ntBASIC1.89□□□□□ -2.11
CDKL5O76039 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.89□□□□□ -2.11
CDKL5O76039 MIR342-201ENST00000362212 99 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 RNA5SP276-201ENST00000362580 94 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 RNU6-153P-201ENST00000364422 104 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 RNY1P6-201ENST00000384193 109 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 SNORA27-201ENST00000384323 126 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 SNORD116-21-201ENST00000384507 92 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 Y_RNA.528-201ENST00000384575 108 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 RNU6-997P-201ENST00000384725 107 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 MIR452-201ENST00000385020 85 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 Y_RNA.649-201ENST00000459077 103 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 RNU7-70P-201ENST00000516941 66 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 MIR3683-201ENST00000580847 82 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 HSPE1P19-201ENST00000603327 295 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.88□□□□□ -2.11
CDKL5O76039 AL596211.1-201ENST00000569873 2277 ntBASIC1.88□□□□□ -2.11
CDKL5O76039 U8.17-201ENST00000391292 132 ntBASIC1.87□□□□□ -2.11
CDKL5O76039 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDKL5O76039 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.87□□□□□ -2.11
CDKL5O76039 SNORA31.4-201ENST00000516049 129 ntBASIC1.87□□□□□ -2.11
CDKL5O76039 RNU6-548P-201ENST00000517083 115 ntBASIC1.87□□□□□ -2.11
CDKL5O76039 SNORD3E-202ENST00000627253 216 ntBASIC1.87□□□□□ -2.11
CDKL5O76039 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.87□□□□□ -2.11
CDKL5O76039 SNORD115-34-201ENST00000362441 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-12-201ENST00000362583 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-29-201ENST00000362834 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-9-201ENST00000362912 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-21-201ENST00000362963 81 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-14-201ENST00000363090 81 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-13-201ENST00000363358 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-41-201ENST00000363608 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-11-201ENST00000363616 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-5-201ENST00000363633 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-39-201ENST00000363694 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-4-201ENST00000363810 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-16-201ENST00000363887 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-6-201ENST00000363942 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-42-201ENST00000364273 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 RNU4-16P-201ENST00000364737 141 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-15-201ENST00000364809 81 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-1-201ENST00000364961 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-26-201ENST00000365067 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-10-201ENST00000365073 81 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-43-201ENST00000365503 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-36-201ENST00000365629 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 MIR1267-201ENST00000408723 78 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.86□□□□□ -2.11
CDKL5O76039 AC063976.4-201ENST00000421971 163 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 RNU7-80P-201ENST00000459562 61 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 PDCD5P2-201ENST00000507570 312 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 RNY4P20-201ENST00000516678 93 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 AC021443.1-201ENST00000604478 211 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 SNORD115-40-201ENST00000606510 82 ntBASIC1.86□□□□□ -2.11
CDKL5O76039 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.86□□□□□ -2.11
CDKL5O76039 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
CDKL5O76039 SNORA22-201ENST00000383907 134 ntBASIC1.85□□□□□ -2.11
CDKL5O76039 MIR136-201ENST00000385207 82 ntBASIC1.85□□□□□ -2.11
CDKL5O76039 RNA5SP136-201ENST00000410906 107 ntBASIC1.85□□□□□ -2.11
CDKL5O76039 RPS29P24-201ENST00000486345 171 ntBASIC1.85□□□□□ -2.11
CDKL5O76039 RNU6-998P-201ENST00000515894 101 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms