Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.37□□□□□ -1.87
RNF40O75150 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.37□□□□□ -1.87
RNF40O75150 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF40O75150 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF40O75150 RNU6-461P-201ENST00000364195 107 ntBASIC3.36□□□□□ -1.87
RNF40O75150 SNORD38.2-201ENST00000384470 69 ntBASIC3.36□□□□□ -1.87
RNF40O75150 Y_RNA.510-201ENST00000384511 114 ntBASIC3.36□□□□□ -1.87
RNF40O75150 RNA5SP344-201ENST00000411081 104 ntBASIC3.36□□□□□ -1.87
RNF40O75150 AC006483.1-201ENST00000487308 313 ntBASIC3.36□□□□□ -1.87
RNF40O75150 AP001362.1-201ENST00000625165 124 ntBASIC3.36□□□□□ -1.87
RNF40O75150 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF40O75150 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.36□□□□□ -1.87
RNF40O75150 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF40O75150 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF40O75150 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RNF40O75150 Y_RNA.168-201ENST00000363740 102 ntBASIC3.35□□□□□ -1.87
RNF40O75150 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RNF40O75150 RNU6-602P-201ENST00000411155 105 ntBASIC3.35□□□□□ -1.87
RNF40O75150 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF40O75150 uc_338.1-201ENST00000612113 180 ntBASIC3.35□□□□□ -1.87
RNF40O75150 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF40O75150 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
RNF40O75150 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF40O75150 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF40O75150 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF40O75150 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF40O75150 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF40O75150 Y_RNA.98-201ENST00000363109 102 ntBASIC3.34□□□□□ -1.87
RNF40O75150 RNU6-950P-201ENST00000384651 107 ntBASIC3.34□□□□□ -1.87
RNF40O75150 SNORA40.18-201ENST00000391200 128 ntBASIC3.34□□□□□ -1.87
RNF40O75150 MIR1265-201ENST00000408444 86 ntBASIC3.34□□□□□ -1.87
RNF40O75150 MIR1289-1-201ENST00000408836 144 ntBASIC3.34□□□□□ -1.87
RNF40O75150 RN7SL863P-201ENST00000462370 296 ntBASIC3.34□□□□□ -1.87
RNF40O75150 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNF40O75150 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RNF40O75150 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF40O75150 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF40O75150 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF40O75150 RNU1-58P-201ENST00000362413 163 ntBASIC3.33□□□□□ -1.88
RNF40O75150 RNU1-70P-201ENST00000362618 164 ntBASIC3.33□□□□□ -1.88
RNF40O75150 SNORA80A-201ENST00000363922 136 ntBASIC3.33□□□□□ -1.88
RNF40O75150 RNA5SP229-201ENST00000410809 99 ntBASIC3.33□□□□□ -1.88
RNF40O75150 SCARNA16.3-201ENST00000516595 184 ntBASIC3.33□□□□□ -1.88
RNF40O75150 MIR3616-201ENST00000584070 92 ntBASIC3.33□□□□□ -1.88
RNF40O75150 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RNF40O75150 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF40O75150 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF40O75150 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF40O75150 AC245060.5-201ENST00000610778 3293 ntBASIC3.32□□□□□ -1.88
RNF40O75150 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF40O75150 Y_RNA.532-201ENST00000384590 113 ntBASIC3.32□□□□□ -1.88
RNF40O75150 RNU1-101P-201ENST00000391171 127 ntBASIC3.32□□□□□ -1.88
RNF40O75150 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF40O75150 RNU7-85P-201ENST00000458851 63 ntBASIC3.32□□□□□ -1.88
RNF40O75150 AP004217.1-201ENST00000480579 346 ntBASIC3.32□□□□□ -1.88
RNF40O75150 AC234781.5-201ENST00000508429 271 ntBASIC3.32□□□□□ -1.88
RNF40O75150 MTND5P40-201ENST00000559945 246 ntBASIC3.32□□□□□ -1.88
RNF40O75150 SNORD14A-201ENST00000606526 91 ntBASIC3.32□□□□□ -1.88
RNF40O75150 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.32□□□□□ -1.88
RNF40O75150 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF40O75150 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF40O75150 RNU4-32P-201ENST00000363404 141 ntBASIC3.31□□□□□ -1.88
RNF40O75150 SNORA44-201ENST00000384584 132 ntBASIC3.31□□□□□ -1.88
RNF40O75150 RPS29P12-201ENST00000460178 152 ntBASIC3.31□□□□□ -1.88
RNF40O75150 MIR5094-201ENST00000578766 85 ntBASIC3.31□□□□□ -1.88
RNF40O75150 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF40O75150 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RNF40O75150 SNORA63.2-201ENST00000362603 126 ntBASIC3.3□□□□□ -1.88
RNF40O75150 RNY1P13-201ENST00000365030 105 ntBASIC3.3□□□□□ -1.88
RNF40O75150 Y_RNA.354-201ENST00000365448 111 ntBASIC3.3□□□□□ -1.88
RNF40O75150 RPL23AP6-201ENST00000446637 472 ntBASIC3.3□□□□□ -1.88
RNF40O75150 MIR7106-201ENST00000612419 65 ntBASIC3.3□□□□□ -1.88
RNF40O75150 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.3□□□□□ -1.88
RNF40O75150 AC093010.3-201ENST00000570269 15214 ntBASIC3.3□□□□□ -1.88
RNF40O75150 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RNF40O75150 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RNF40O75150 AC108206.1-201ENST00000570186 4159 ntBASIC3.29□□□□□ -1.88
RNF40O75150 RNU6-686P-201ENST00000364839 107 ntBASIC3.29□□□□□ -1.88
RNF40O75150 AC104332.2-201ENST00000429959 156 ntBASIC3.29□□□□□ -1.88
RNF40O75150 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.29□□□□□ -1.88
RNF40O75150 RNU6-1015P-201ENST00000517121 99 ntBASIC3.29□□□□□ -1.88
RNF40O75150 AC021506.2-201ENST00000612354 169 ntBASIC3.29□□□□□ -1.88
RNF40O75150 AL513423.1-201ENST00000621695 132 ntBASIC3.29□□□□□ -1.88
RNF40O75150 AL137790.1-201ENST00000634283 177 ntBASIC3.29□□□□□ -1.88
RNF40O75150 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF40O75150 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF40O75150 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RNF40O75150 RNU6-411P-201ENST00000384451 107 ntBASIC3.28□□□□□ -1.88
RNF40O75150 MIR660-201ENST00000385235 97 ntBASIC3.28□□□□□ -1.88
RNF40O75150 AC099513.1-201ENST00000490423 301 ntBASIC3.28□□□□□ -1.88
RNF40O75150 AC008885.1-201ENST00000514930 301 ntBASIC3.28□□□□□ -1.88
RNF40O75150 RN7SKP132-201ENST00000516001 208 ntBASIC3.28□□□□□ -1.88
RNF40O75150 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF40O75150 AL033523.1-201ENST00000605153 153 ntBASIC3.28□□□□□ -1.88
RNF40O75150 MIR6733-201ENST00000635723 61 ntBASIC3.28□□□□□ -1.88
RNF40O75150 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF40O75150 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF40O75150 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF40O75150 MIR887-201ENST00000401258 79 ntBASIC3.27□□□□□ -1.89
RNF40O75150 BX510359.4-201ENST00000423750 193 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms