Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SNORD115-14-201ENST00000363090 81 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-13-201ENST00000363358 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-41-201ENST00000363608 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-11-201ENST00000363616 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-5-201ENST00000363633 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-39-201ENST00000363694 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-4-201ENST00000363810 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-16-201ENST00000363887 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-6-201ENST00000363942 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-42-201ENST00000364273 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 Y_RNA.241-201ENST00000364470 117 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-15-201ENST00000364809 81 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-1-201ENST00000364961 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-26-201ENST00000365067 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-10-201ENST00000365073 81 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-43-201ENST00000365503 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-36-201ENST00000365629 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 MIR569-201ENST00000385228 96 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORA40.5-201ENST00000391061 128 ntBASIC1.42□□□□□ -2.18
LDB2O43679 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
LDB2O43679 RNU6-321P-201ENST00000410912 106 ntBASIC1.42□□□□□ -2.18
LDB2O43679 RNU6-346P-201ENST00000516288 111 ntBASIC1.42□□□□□ -2.18
LDB2O43679 RNU6-922P-201ENST00000516753 99 ntBASIC1.42□□□□□ -2.18
LDB2O43679 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.42□□□□□ -2.18
LDB2O43679 AL359821.1-201ENST00000605519 182 ntBASIC1.42□□□□□ -2.18
LDB2O43679 SNORD115-40-201ENST00000606510 82 ntBASIC1.42□□□□□ -2.18
LDB2O43679 MIR376A2-201ENST00000636782 80 ntBASIC1.42□□□□□ -2.18
LDB2O43679 ZNF209P-201ENST00000593450 2304 ntBASIC1.41□□□□□ -2.18
LDB2O43679 Y_RNA.251-201ENST00000364551 99 ntBASIC1.41□□□□□ -2.18
LDB2O43679 Y_RNA.343-201ENST00000365354 112 ntBASIC1.41□□□□□ -2.18
LDB2O43679 Y_RNA.370-201ENST00000365589 108 ntBASIC1.41□□□□□ -2.18
LDB2O43679 Y_RNA.497-201ENST00000384447 98 ntBASIC1.41□□□□□ -2.18
LDB2O43679 SNORD41-201ENST00000386967 70 ntBASIC1.41□□□□□ -2.18
LDB2O43679 Y_RNA.584-201ENST00000391090 114 ntBASIC1.41□□□□□ -2.18
LDB2O43679 SNX2P2-201ENST00000424553 323 ntBASIC1.41□□□□□ -2.18
LDB2O43679 AC027119.1-201ENST00000440877 241 ntBASIC1.41□□□□□ -2.18
LDB2O43679 RNU7-197P-201ENST00000458836 62 ntBASIC1.41□□□□□ -2.18
LDB2O43679 SNORA25.12-201ENST00000516202 82 ntBASIC1.41□□□□□ -2.18
LDB2O43679 RNA5SP61-201ENST00000516453 100 ntBASIC1.41□□□□□ -2.18
LDB2O43679 RNU7-43P-201ENST00000516554 64 ntBASIC1.41□□□□□ -2.18
LDB2O43679 MIR548AR-201ENST00000582191 57 ntBASIC1.41□□□□□ -2.18
LDB2O43679 AL357312.1-201ENST00000603879 298 ntBASIC1.41□□□□□ -2.18
LDB2O43679 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.41□□□□□ -2.18
LDB2O43679 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
LDB2O43679 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.4□□□□□ -2.19
LDB2O43679 Y_RNA.52-201ENST00000362760 96 ntBASIC1.4□□□□□ -2.19
LDB2O43679 SNORA7.1-201ENST00000363750 139 ntBASIC1.4□□□□□ -2.19
LDB2O43679 Y_RNA.440-201ENST00000384120 114 ntBASIC1.4□□□□□ -2.19
LDB2O43679 SNORA27-201ENST00000384323 126 ntBASIC1.4□□□□□ -2.19
LDB2O43679 RNU6-1065P-201ENST00000384513 106 ntBASIC1.4□□□□□ -2.19
LDB2O43679 AC107297.1-201ENST00000459991 176 ntBASIC1.4□□□□□ -2.19
LDB2O43679 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.4□□□□□ -2.19
LDB2O43679 RPS26P48-201ENST00000491713 339 ntBASIC1.4□□□□□ -2.19
LDB2O43679 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.4□□□□□ -2.19
LDB2O43679 AC019176.1-201ENST00000518519 225 ntBASIC1.4□□□□□ -2.19
LDB2O43679 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.4□□□□□ -2.19
LDB2O43679 AC090821.2-201ENST00000523552 176 ntBASIC1.4□□□□□ -2.19
LDB2O43679 MIR3937-201ENST00000580135 106 ntBASIC1.4□□□□□ -2.19
LDB2O43679 MIR4764-201ENST00000580680 88 ntBASIC1.4□□□□□ -2.19
LDB2O43679 MIR4422-201ENST00000581938 83 ntBASIC1.4□□□□□ -2.19
LDB2O43679 GHRLOS.1-201ENST00000610995 70 ntBASIC1.4□□□□□ -2.19
LDB2O43679 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.4□□□□□ -2.19
LDB2O43679 RNY1P11-201ENST00000363759 113 ntBASIC1.39□□□□□ -2.19
LDB2O43679 RNU6-1067P-201ENST00000384752 107 ntBASIC1.39□□□□□ -2.19
LDB2O43679 SNORD28B-201ENST00000390993 75 ntBASIC1.39□□□□□ -2.19
LDB2O43679 RNU1-78P-201ENST00000391248 165 ntBASIC1.39□□□□□ -2.19
LDB2O43679 RNA5SP247-201ENST00000411181 105 ntBASIC1.39□□□□□ -2.19
LDB2O43679 AC245517.4-201ENST00000448601 281 ntBASIC1.39□□□□□ -2.19
LDB2O43679 RNU6-1149P-201ENST00000516810 97 ntBASIC1.39□□□□□ -2.19
LDB2O43679 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
LDB2O43679 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
LDB2O43679 Y_RNA.120-201ENST00000363304 110 ntBASIC1.38□□□□□ -2.19
LDB2O43679 SNORD50.2-201ENST00000365465 70 ntBASIC1.38□□□□□ -2.19
LDB2O43679 RNU6-187P-201ENST00000384139 106 ntBASIC1.38□□□□□ -2.19
LDB2O43679 SNORA70.7-201ENST00000384159 133 ntBASIC1.38□□□□□ -2.19
LDB2O43679 MIR520C-201ENST00000385005 87 ntBASIC1.38□□□□□ -2.19
LDB2O43679 RNU1-98P-201ENST00000458992 160 ntBASIC1.38□□□□□ -2.19
LDB2O43679 RPS29P24-201ENST00000486345 171 ntBASIC1.38□□□□□ -2.19
LDB2O43679 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
LDB2O43679 RNU2-13P-201ENST00000515909 113 ntBASIC1.38□□□□□ -2.19
LDB2O43679 SNORD111.1-201ENST00000516421 86 ntBASIC1.38□□□□□ -2.19
LDB2O43679 RNU6-426P-201ENST00000516464 97 ntBASIC1.38□□□□□ -2.19
LDB2O43679 SCARNA15-202ENST00000516881 127 ntBASIC1.38□□□□□ -2.19
LDB2O43679 AL157834.3-201ENST00000615543 103 ntBASIC1.38□□□□□ -2.19
LDB2O43679 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.37□□□□□ -2.19
LDB2O43679 Y_RNA.420-201ENST00000384043 110 ntBASIC1.37□□□□□ -2.19
LDB2O43679 Y_RNA.494-201ENST00000384432 111 ntBASIC1.37□□□□□ -2.19
LDB2O43679 Y_RNA.537-201ENST00000384626 109 ntBASIC1.37□□□□□ -2.19
LDB2O43679 Y_RNA.568-201ENST00000384742 113 ntBASIC1.37□□□□□ -2.19
LDB2O43679 MIR613-201ENST00000385248 95 ntBASIC1.37□□□□□ -2.19
LDB2O43679 RNU6-460P-201ENST00000391158 108 ntBASIC1.37□□□□□ -2.19
LDB2O43679 MTATP6P21-201ENST00000440681 189 ntBASIC1.37□□□□□ -2.19
LDB2O43679 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.37□□□□□ -2.19
LDB2O43679 RNU7-96P-201ENST00000459535 64 ntBASIC1.37□□□□□ -2.19
LDB2O43679 RNU7-80P-201ENST00000459562 61 ntBASIC1.37□□□□□ -2.19
LDB2O43679 RPL30P7-201ENST00000479312 323 ntBASIC1.37□□□□□ -2.19
LDB2O43679 MIR4421-201ENST00000578133 69 ntBASIC1.37□□□□□ -2.19
LDB2O43679 AP001340.1-201ENST00000624405 217 ntBASIC1.37□□□□□ -2.19
LDB2O43679 AC008133.2-201ENST00000624540 351 ntBASIC1.37□□□□□ -2.19
LDB2O43679 MTND5P32-201ENST00000560711 1802 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms