Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
TNFSF12O43508 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TNFSF12O43508 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.82□□□□□ -2.28
TNFSF12O43508 Y_RNA.140-201ENST00000363474 103 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 RNA5SP99-201ENST00000364020 114 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 RNU6-1189P-201ENST00000383958 107 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 MIR200A-201ENST00000384875 90 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 RNU6-578P-201ENST00000390980 103 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 AC090844.1-201ENST00000422019 156 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 AL138752.1-201ENST00000452964 351 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 snoU13.16-201ENST00000459350 104 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 RPS29P24-201ENST00000486345 171 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TNFSF12O43508 AC015712.3-201ENST00000559380 164 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 AC004817.2-201ENST00000561794 651 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 MIR3129-201ENST00000581095 76 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 RNU6-94P-201ENST00000607728 107 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
TNFSF12O43508 Y_RNA.182-201ENST00000363880 111 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 Y_RNA.410-201ENST00000383992 113 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 SNORA2B-201ENST00000384583 137 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 Y_RNA.571-201ENST00000384753 98 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 RNU6-913P-201ENST00000390913 95 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 SNORD77.3-201ENST00000391113 65 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 RNU6-613P-201ENST00000410412 108 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 RNU4-43P-201ENST00000410628 137 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 AP1B1P2-201ENST00000416196 106 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 BTF3P4-201ENST00000418852 495 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.81□□□□□ -2.28
TNFSF12O43508 snoU13.23-201ENST00000458863 104 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 AC087343.1-201ENST00000477341 475 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 PDCD5P2-201ENST00000507570 312 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 AC106800.4-201ENST00000614905 153 ntBASIC0.81□□□□□ -2.28
TNFSF12O43508 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TNFSF12O43508 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TNFSF12O43508 MIR342-201ENST00000362212 99 ntBASIC0.8□□□□□ -2.28
TNFSF12O43508 RNU4-38P-201ENST00000364472 129 ntBASIC0.8□□□□□ -2.28
TNFSF12O43508 SNORD113.3-201ENST00000364630 78 ntBASIC0.8□□□□□ -2.28
TNFSF12O43508 Y_RNA.440-201ENST00000384120 114 ntBASIC0.8□□□□□ -2.28
TNFSF12O43508 RNU6-125P-201ENST00000384505 107 ntBASIC0.8□□□□□ -2.28
TNFSF12O43508 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
TNFSF12O43508 RNU6-205P-201ENST00000390858 107 ntBASIC0.8□□□□□ -2.28
TNFSF12O43508 UBL5P1-201ENST00000507979 193 ntBASIC0.8□□□□□ -2.28
TNFSF12O43508 AC103810.9-201ENST00000606688 112 ntBASIC0.8□□□□□ -2.28
TNFSF12O43508 AC012676.2-201ENST00000619258 186 ntBASIC0.8□□□□□ -2.28
TNFSF12O43508 MIR376A2-201ENST00000636782 80 ntBASIC0.8□□□□□ -2.28
TNFSF12O43508 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TNFSF12O43508 MIR378A-201ENST00000362177 66 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 Y_RNA.121-201ENST00000363309 113 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 RNY1-201ENST00000364228 113 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 RNU4-70P-201ENST00000384579 139 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 SNORD111-201ENST00000408139 94 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.79□□□□□ -2.28
TNFSF12O43508 AL035398.1-201ENST00000430869 322 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 HMGN1P33-201ENST00000432945 451 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 RNU7-73P-201ENST00000458743 63 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 AC005840.1-201ENST00000498412 377 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.79□□□□□ -2.28
TNFSF12O43508 RNU7-53P-201ENST00000516705 60 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 AL391516.1-201ENST00000554380 2449 ntBASIC0.79□□□□□ -2.28
TNFSF12O43508 Y_RNA.200-201ENST00000364018 102 ntBASIC0.78□□□□□ -2.28
TNFSF12O43508 RNU6-994P-201ENST00000410507 111 ntBASIC0.78□□□□□ -2.28
TNFSF12O43508 FABP5P4-201ENST00000437203 171 ntBASIC0.78□□□□□ -2.28
TNFSF12O43508 RNU2-11P-201ENST00000459191 187 ntBASIC0.78□□□□□ -2.28
TNFSF12O43508 RNU7-96P-201ENST00000459535 64 ntBASIC0.78□□□□□ -2.28
TNFSF12O43508 RNU6-998P-201ENST00000515894 101 ntBASIC0.78□□□□□ -2.28
TNFSF12O43508 MIR378D2-201ENST00000580636 98 ntBASIC0.78□□□□□ -2.28
TNFSF12O43508 MIR4661-201ENST00000582720 75 ntBASIC0.78□□□□□ -2.28
TNFSF12O43508 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
TNFSF12O43508 AL020996.3-201ENST00000606617 222 ntBASIC0.78□□□□□ -2.28
TNFSF12O43508 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.77□□□□□ -2.29
TNFSF12O43508 Y_RNA.83-201ENST00000363005 113 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 Y_RNA.489-201ENST00000384410 101 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 Y_RNA.542-201ENST00000384641 111 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 SNORD89-201ENST00000390981 114 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 RNU6-918P-201ENST00000391219 106 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 RNU6-1190P-201ENST00000410811 104 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 AC244023.1-201ENST00000426884 112 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.77□□□□□ -2.29
TNFSF12O43508 SNORD116-25-201ENST00000516517 92 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 AP000753.3-201ENST00000604083 169 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 AC242498.1-201ENST00000604134 111 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 MIR8055-201ENST00000610739 97 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 U6.106-201ENST00000636360 105 ntBASIC0.77□□□□□ -2.29
TNFSF12O43508 MIR411-201ENST00000362239 96 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 Y_RNA.168-201ENST00000363740 102 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 RNU6-978P-201ENST00000364371 103 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 RNU6-275P-201ENST00000364910 107 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 Y_RNA.351-201ENST00000365436 96 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 RNU6-47P-201ENST00000383866 107 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 Y_RNA.412-201ENST00000384001 104 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 MT-TN-201ENST00000387400 73 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 MIR548I3-201ENST00000408378 149 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 Y_RNA.618-201ENST00000410949 107 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 RPS3AP1-201ENST00000413190 320 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 SEPT7P4-201ENST00000437076 306 ntBASIC0.76□□□□□ -2.29
TNFSF12O43508 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.76□□□□□ -2.29
TNFSF12O43508 AC067940.1-201ENST00000458411 300 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 212.3 ms