Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 Y_RNA.251-201ENST00000364551 99 ntBASIC1.57□□□□□ -2.16
PHGDHO43175 SNORA27-201ENST00000384323 126 ntBASIC1.57□□□□□ -2.16
PHGDHO43175 SNORA51.10-201ENST00000384418 136 ntBASIC1.57□□□□□ -2.16
PHGDHO43175 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
PHGDHO43175 MIR624-201ENST00000385217 97 ntBASIC1.57□□□□□ -2.16
PHGDHO43175 MIR569-201ENST00000385228 96 ntBASIC1.57□□□□□ -2.16
PHGDHO43175 RNU6-460P-201ENST00000391158 108 ntBASIC1.57□□□□□ -2.16
PHGDHO43175 MIR3192-201ENST00000584920 77 ntBASIC1.57□□□□□ -2.16
PHGDHO43175 MIR502-201ENST00000606349 86 ntBASIC1.57□□□□□ -2.16
PHGDHO43175 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.56□□□□□ -2.16
PHGDHO43175 RNU6-508P-201ENST00000363231 103 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 RNU6-746P-201ENST00000384112 109 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 Y_RNA.440-201ENST00000384120 114 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 Y_RNA.537-201ENST00000384626 109 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 MIR548M-201ENST00000408260 86 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.56□□□□□ -2.16
PHGDHO43175 AL591806.2-201ENST00000433122 173 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 AC108210.2-201ENST00000503681 201 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 RNU6-426P-201ENST00000516464 97 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 MIR548X2-201ENST00000579776 100 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 MIR5197-201ENST00000583721 112 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 MIR4791-201ENST00000607666 84 ntBASIC1.56□□□□□ -2.16
PHGDHO43175 Y_RNA.52-201ENST00000362760 96 ntBASIC1.55□□□□□ -2.16
PHGDHO43175 RNA5SP48-201ENST00000363969 126 ntBASIC1.55□□□□□ -2.16
PHGDHO43175 RNY1P5-201ENST00000383890 115 ntBASIC1.55□□□□□ -2.16
PHGDHO43175 SNORA70.7-201ENST00000384159 133 ntBASIC1.55□□□□□ -2.16
PHGDHO43175 Y_RNA.488-201ENST00000384403 102 ntBASIC1.55□□□□□ -2.16
PHGDHO43175 RNU7-67P-201ENST00000459003 62 ntBASIC1.55□□□□□ -2.16
PHGDHO43175 SCARNA15-202ENST00000516881 127 ntBASIC1.55□□□□□ -2.16
PHGDHO43175 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.55□□□□□ -2.16
PHGDHO43175 AC243994.1-201ENST00000618627 109 ntBASIC1.55□□□□□ -2.16
PHGDHO43175 MIR8065-201ENST00000620577 100 ntBASIC1.55□□□□□ -2.16
PHGDHO43175 MIR4251-201ENST00000635819 61 ntBASIC1.55□□□□□ -2.16
PHGDHO43175 AL161722.3-201ENST00000605789 2983 ntBASIC1.55□□□□□ -2.16
PHGDHO43175 MIR342-201ENST00000362212 99 ntBASIC1.54□□□□□ -2.16
PHGDHO43175 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
PHGDHO43175 RPS29P29-201ENST00000456396 171 ntBASIC1.54□□□□□ -2.16
PHGDHO43175 RPS29P24-201ENST00000486345 171 ntBASIC1.54□□□□□ -2.16
PHGDHO43175 RNU2-13P-201ENST00000515909 113 ntBASIC1.54□□□□□ -2.16
PHGDHO43175 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
PHGDHO43175 Y_RNA.686-201ENST00000516548 134 ntBASIC1.54□□□□□ -2.16
PHGDHO43175 RNU6-1149P-201ENST00000516810 97 ntBASIC1.54□□□□□ -2.16
PHGDHO43175 Y_RNA.703-201ENST00000516846 111 ntBASIC1.54□□□□□ -2.16
PHGDHO43175 RNU2-60P-201ENST00000517290 128 ntBASIC1.54□□□□□ -2.16
PHGDHO43175 AC131055.1-201ENST00000584626 316 ntBASIC1.54□□□□□ -2.16
PHGDHO43175 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PHGDHO43175 U8.1-201ENST00000362843 134 ntBASIC1.53□□□□□ -2.16
PHGDHO43175 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
PHGDHO43175 Y_RNA.584-201ENST00000391090 114 ntBASIC1.53□□□□□ -2.16
PHGDHO43175 MIR513C-201ENST00000401352 84 ntBASIC1.53□□□□□ -2.16
PHGDHO43175 MIR4255-201ENST00000579351 72 ntBASIC1.53□□□□□ -2.16
PHGDHO43175 MIR4524B-201ENST00000581569 115 ntBASIC1.53□□□□□ -2.16
PHGDHO43175 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.52□□□□□ -2.17
PHGDHO43175 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PHGDHO43175 MIR1304-201ENST00000408243 91 ntBASIC1.52□□□□□ -2.17
PHGDHO43175 snoU13.25-201ENST00000458945 104 ntBASIC1.52□□□□□ -2.17
PHGDHO43175 AC048334.1-201ENST00000477975 159 ntBASIC1.52□□□□□ -2.17
PHGDHO43175 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.52□□□□□ -2.17
PHGDHO43175 AL133373.1-201ENST00000497098 94 ntBASIC1.52□□□□□ -2.17
PHGDHO43175 SNORA31.4-201ENST00000516049 129 ntBASIC1.52□□□□□ -2.17
PHGDHO43175 RNU6-958P-201ENST00000516995 106 ntBASIC1.52□□□□□ -2.17
PHGDHO43175 AC015712.3-201ENST00000559380 164 ntBASIC1.52□□□□□ -2.17
PHGDHO43175 MIR3683-201ENST00000580847 82 ntBASIC1.52□□□□□ -2.17
PHGDHO43175 BX248123.2-201ENST00000606318 124 ntBASIC1.52□□□□□ -2.17
PHGDHO43175 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.52□□□□□ -2.17
PHGDHO43175 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.51□□□□□ -2.17
PHGDHO43175 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
PHGDHO43175 SNORA25.3-201ENST00000363205 127 ntBASIC1.51□□□□□ -2.17
PHGDHO43175 Y_RNA.351-201ENST00000365436 96 ntBASIC1.51□□□□□ -2.17
PHGDHO43175 Y_RNA.420-201ENST00000384043 110 ntBASIC1.51□□□□□ -2.17
PHGDHO43175 AL603908.1-201ENST00000406098 201 ntBASIC1.51□□□□□ -2.17
PHGDHO43175 RNU7-96P-201ENST00000459535 64 ntBASIC1.51□□□□□ -2.17
PHGDHO43175 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
PHGDHO43175 SNORA31.2-201ENST00000516019 134 ntBASIC1.51□□□□□ -2.17
PHGDHO43175 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
PHGDHO43175 RNU6-309P-201ENST00000364573 106 ntBASIC1.5□□□□□ -2.17
PHGDHO43175 SNORA24-201ENST00000384096 131 ntBASIC1.5□□□□□ -2.17
PHGDHO43175 Y_RNA.568-201ENST00000384742 113 ntBASIC1.5□□□□□ -2.17
PHGDHO43175 AC245047.7-201ENST00000440265 293 ntBASIC1.5□□□□□ -2.17
PHGDHO43175 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.5□□□□□ -2.17
PHGDHO43175 RNU7-70P-201ENST00000516941 66 ntBASIC1.5□□□□□ -2.17
PHGDHO43175 RNU6-1054P-201ENST00000411293 104 ntBASIC1.49□□□□□ -2.17
PHGDHO43175 AL035398.1-201ENST00000430869 322 ntBASIC1.49□□□□□ -2.17
PHGDHO43175 AC009474.2-201ENST00000451383 136 ntBASIC1.49□□□□□ -2.17
PHGDHO43175 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
PHGDHO43175 RNU7-80P-201ENST00000459562 61 ntBASIC1.49□□□□□ -2.17
PHGDHO43175 RNU6-998P-201ENST00000515894 101 ntBASIC1.49□□□□□ -2.17
PHGDHO43175 RNA5SP236-201ENST00000516169 116 ntBASIC1.49□□□□□ -2.17
PHGDHO43175 RNU7-53P-201ENST00000516705 60 ntBASIC1.49□□□□□ -2.17
PHGDHO43175 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.49□□□□□ -2.17
PHGDHO43175 HSPE1P19-201ENST00000603327 295 ntBASIC1.49□□□□□ -2.17
PHGDHO43175 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
PHGDHO43175 MIR103A2-201ENST00000362154 78 ntBASIC1.48□□□□□ -2.17
PHGDHO43175 RNA5SP190-201ENST00000365222 118 ntBASIC1.48□□□□□ -2.17
PHGDHO43175 Y_RNA.343-201ENST00000365354 112 ntBASIC1.48□□□□□ -2.17
PHGDHO43175 RNU6-482P-201ENST00000391068 107 ntBASIC1.48□□□□□ -2.17
PHGDHO43175 RNU6-257P-201ENST00000410238 98 ntBASIC1.48□□□□□ -2.17
PHGDHO43175 RNU2-11P-201ENST00000459191 187 ntBASIC1.48□□□□□ -2.17
PHGDHO43175 snoU13.16-201ENST00000459350 104 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms