Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MIR513A1-201ENST00000385138 129 ntBASIC2.15□□□□□ -2.07
SHOXO15266 AL451046.2-201ENST00000403074 277 ntBASIC2.15□□□□□ -2.07
SHOXO15266 RNA5SP21-201ENST00000410917 96 ntBASIC2.15□□□□□ -2.07
SHOXO15266 AC244636.1-201ENST00000421152 228 ntBASIC2.15□□□□□ -2.07
SHOXO15266 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.15□□□□□ -2.07
SHOXO15266 RPS23P4-201ENST00000487908 423 ntBASIC2.15□□□□□ -2.07
SHOXO15266 AC022523.2-201ENST00000561045 150 ntBASIC2.15□□□□□ -2.07
SHOXO15266 AL020996.3-201ENST00000606617 222 ntBASIC2.15□□□□□ -2.07
SHOXO15266 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
SHOXO15266 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.14□□□□□ -2.07
SHOXO15266 SNORA22.1-201ENST00000362701 134 ntBASIC2.14□□□□□ -2.07
SHOXO15266 Y_RNA.163-201ENST00000363702 113 ntBASIC2.14□□□□□ -2.07
SHOXO15266 Y_RNA.323-201ENST00000365157 109 ntBASIC2.14□□□□□ -2.07
SHOXO15266 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
SHOXO15266 RNA5SP259-201ENST00000365541 109 ntBASIC2.14□□□□□ -2.07
SHOXO15266 RNU6-1014P-201ENST00000383940 103 ntBASIC2.14□□□□□ -2.07
SHOXO15266 RNU6-106P-201ENST00000384405 107 ntBASIC2.14□□□□□ -2.07
SHOXO15266 POLR2J4-204ENST00000418424 324 ntBASIC2.14□□□□□ -2.07
SHOXO15266 RNU6-917P-201ENST00000516294 104 ntBASIC2.14□□□□□ -2.07
SHOXO15266 RNU7-6P-201ENST00000516845 62 ntBASIC2.14□□□□□ -2.07
SHOXO15266 MIR4764-201ENST00000580680 88 ntBASIC2.14□□□□□ -2.07
SHOXO15266 ELOCP29-201ENST00000588193 334 ntBASIC2.14□□□□□ -2.07
SHOXO15266 RNU6-94P-201ENST00000607728 107 ntBASIC2.14□□□□□ -2.07
SHOXO15266 AL773524.1-201ENST00000614065 229 ntBASIC2.14□□□□□ -2.07
SHOXO15266 AC008133.2-201ENST00000624540 351 ntBASIC2.14□□□□□ -2.07
SHOXO15266 RNU1-112P-201ENST00000364401 164 ntBASIC2.13□□□□□ -2.07
SHOXO15266 RNU6-1104P-201ENST00000384723 104 ntBASIC2.13□□□□□ -2.07
SHOXO15266 MIR520C-201ENST00000385005 87 ntBASIC2.13□□□□□ -2.07
SHOXO15266 MIR653-201ENST00000385279 96 ntBASIC2.13□□□□□ -2.07
SHOXO15266 RNU7-45P-201ENST00000459460 63 ntBASIC2.13□□□□□ -2.07
SHOXO15266 MIR3945-201ENST00000581853 98 ntBASIC2.13□□□□□ -2.07
SHOXO15266 MIR4713-201ENST00000582691 75 ntBASIC2.13□□□□□ -2.07
SHOXO15266 MIR6717-201ENST00000622747 73 ntBASIC2.13□□□□□ -2.07
SHOXO15266 MIR6841-201ENST00000637129 72 ntBASIC2.13□□□□□ -2.07
SHOXO15266 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SHOXO15266 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SHOXO15266 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.12□□□□□ -2.07
SHOXO15266 SNORA1.1-201ENST00000364671 133 ntBASIC2.12□□□□□ -2.07
SHOXO15266 MIR9-1-201ENST00000385198 89 ntBASIC2.12□□□□□ -2.07
SHOXO15266 MIR1912-201ENST00000410389 80 ntBASIC2.12□□□□□ -2.07
SHOXO15266 RNU6-554P-201ENST00000410466 106 ntBASIC2.12□□□□□ -2.07
SHOXO15266 RPS3AP1-201ENST00000413190 320 ntBASIC2.12□□□□□ -2.07
SHOXO15266 AL512326.2-201ENST00000426359 151 ntBASIC2.12□□□□□ -2.07
SHOXO15266 AC113410.1-201ENST00000505029 247 ntBASIC2.12□□□□□ -2.07
SHOXO15266 RNU6-237P-201ENST00000515985 71 ntBASIC2.12□□□□□ -2.07
SHOXO15266 SNORA31.4-201ENST00000516049 129 ntBASIC2.12□□□□□ -2.07
SHOXO15266 RNU6-168P-201ENST00000516189 101 ntBASIC2.12□□□□□ -2.07
SHOXO15266 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SHOXO15266 MIR450A1-201ENST00000362262 91 ntBASIC2.11□□□□□ -2.07
SHOXO15266 MIRLET7G-201ENST00000362280 84 ntBASIC2.11□□□□□ -2.07
SHOXO15266 RNU6-766P-201ENST00000362478 107 ntBASIC2.11□□□□□ -2.07
SHOXO15266 SNORD115-2-201ENST00000362842 82 ntBASIC2.11□□□□□ -2.07
SHOXO15266 SNORD115-20-201ENST00000365099 82 ntBASIC2.11□□□□□ -2.07
SHOXO15266 Y_RNA.354-201ENST00000365448 111 ntBASIC2.11□□□□□ -2.07
SHOXO15266 MT-TI-201ENST00000387365 69 ntBASIC2.11□□□□□ -2.07
SHOXO15266 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SHOXO15266 SNORD77B-201ENST00000391112 67 ntBASIC2.11□□□□□ -2.07
SHOXO15266 MIR1261-201ENST00000408659 82 ntBASIC2.11□□□□□ -2.07
SHOXO15266 RNU4-69P-201ENST00000410677 143 ntBASIC2.11□□□□□ -2.07
SHOXO15266 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
SHOXO15266 AL161935.2-201ENST00000414627 60 ntBASIC2.11□□□□□ -2.07
SHOXO15266 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.11□□□□□ -2.07
SHOXO15266 AC104435.1-201ENST00000483483 166 ntBASIC2.11□□□□□ -2.07
SHOXO15266 RNA5SP281-201ENST00000516504 135 ntBASIC2.11□□□□□ -2.07
SHOXO15266 AC068339.1-201ENST00000526965 141 ntBASIC2.11□□□□□ -2.07
SHOXO15266 AC022254.1-201ENST00000567857 235 ntBASIC2.11□□□□□ -2.07
SHOXO15266 MIR5009-201ENST00000578736 100 ntBASIC2.11□□□□□ -2.07
SHOXO15266 AL162726.3-218ENST00000636401 95 ntBASIC2.11□□□□□ -2.07
SHOXO15266 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SHOXO15266 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SHOXO15266 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
SHOXO15266 AL359851.1-201ENST00000569460 4997 ntBASIC2.1□□□□□ -2.07
SHOXO15266 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.1□□□□□ -2.07
SHOXO15266 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SHOXO15266 U8.6-201ENST00000364939 135 ntBASIC2.1□□□□□ -2.07
SHOXO15266 Y_RNA.344-201ENST00000365381 112 ntBASIC2.1□□□□□ -2.07
SHOXO15266 RNU6-756P-201ENST00000383997 107 ntBASIC2.1□□□□□ -2.07
SHOXO15266 SNORA51.5-201ENST00000384126 131 ntBASIC2.1□□□□□ -2.07
SHOXO15266 Y_RNA.495-201ENST00000384435 112 ntBASIC2.1□□□□□ -2.07
SHOXO15266 RNU6-913P-201ENST00000390913 95 ntBASIC2.1□□□□□ -2.07
SHOXO15266 SNORA26.6-201ENST00000391256 115 ntBASIC2.1□□□□□ -2.07
SHOXO15266 AC008413.1-201ENST00000511864 177 ntBASIC2.1□□□□□ -2.07
SHOXO15266 MIR3162-201ENST00000581818 82 ntBASIC2.1□□□□□ -2.07
SHOXO15266 AL357312.1-201ENST00000603879 298 ntBASIC2.1□□□□□ -2.07
SHOXO15266 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SHOXO15266 Y_RNA.507-201ENST00000384500 99 ntBASIC2.09□□□□□ -2.07
SHOXO15266 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.07
SHOXO15266 RNU2-40P-201ENST00000410833 196 ntBASIC2.09□□□□□ -2.07
SHOXO15266 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.09□□□□□ -2.07
SHOXO15266 RPL39P25-201ENST00000449384 154 ntBASIC2.09□□□□□ -2.07
SHOXO15266 RNA5SP33-201ENST00000516687 98 ntBASIC2.09□□□□□ -2.07
SHOXO15266 AC079600.2-201ENST00000550076 130 ntBASIC2.09□□□□□ -2.07
SHOXO15266 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.09□□□□□ -2.07
SHOXO15266 MIR4672-201ENST00000583126 81 ntBASIC2.09□□□□□ -2.07
SHOXO15266 AC103810.6-201ENST00000606708 136 ntBASIC2.09□□□□□ -2.07
SHOXO15266 MIR8074-201ENST00000615081 81 ntBASIC2.09□□□□□ -2.07
SHOXO15266 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.09□□□□□ -2.07
SHOXO15266 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SHOXO15266 RNU6-859P-201ENST00000362728 107 ntBASIC2.08□□□□□ -2.08
SHOXO15266 SNORD115-19-201ENST00000363098 82 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms