Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU6-318P-201ENST00000384283 103 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 MIR517A-201ENST00000385001 87 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 RNU6-710P-201ENST00000410424 105 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 MTND3P8-201ENST00000412909 339 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 MTND1P27-201ENST00000451117 902 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 MTND3P7-201ENST00000474435 343 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 AC122108.2-201ENST00000611946 526 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 AC007494.3-201ENST00000624660 743 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 U6.109-201ENST00000636749 87 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.78□□□□□ -2.69
HMGN4O00479 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 SNORD116-9-201ENST00000384000 95 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 SNORD116-3-201ENST00000384287 95 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 SNORD116-8-201ENST00000384365 95 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 SNORD116-7-201ENST00000384404 95 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 SNORD116-5-201ENST00000384462 95 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 AC097635.1-201ENST00000450678 155 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 MIR5704-201ENST00000584029 77 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 AC060780.3-201ENST00000589464 80 ntBASIC-1.78□□□□□ -2.69
HMGN4O00479 MIR302B-201ENST00000362188 73 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 SNORA18-201ENST00000384416 132 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 MIR190B-201ENST00000401119 79 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 RNU6-408P-201ENST00000515910 100 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 RNU2-31P-201ENST00000516954 155 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 AL080274.1-201ENST00000605565 220 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 DISC2.1-201ENST00000612827 205 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 MIR6854-201ENST00000614935 69 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 MIR548AY-201ENST00000617669 107 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 AC022140.2-201ENST00000623500 188 ntBASIC-1.79□□□□□ -2.7
HMGN4O00479 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.8□□□□□ -2.7
HMGN4O00479 SNORD115-35-201ENST00000365122 82 ntBASIC-1.8□□□□□ -2.7
HMGN4O00479 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.8□□□□□ -2.7
HMGN4O00479 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.8□□□□□ -2.7
HMGN4O00479 RNU6-95P-201ENST00000384697 107 ntBASIC-1.8□□□□□ -2.7
HMGN4O00479 MIR548AB-201ENST00000584917 84 ntBASIC-1.8□□□□□ -2.7
HMGN4O00479 AL022161.1-201ENST00000604390 213 ntBASIC-1.8□□□□□ -2.7
HMGN4O00479 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 RNY1P2-201ENST00000364820 117 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 RNU6-38P-201ENST00000384085 107 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 MIR519E-201ENST00000385075 84 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 SNORA49-201ENST00000386157 136 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 SNORD12B-201ENST00000410433 91 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 AC098614.3-201ENST00000438957 440 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.81□□□□□ -2.7
HMGN4O00479 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.81□□□□□ -2.7
HMGN4O00479 SERF1AP1-201ENST00000514575 187 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 RNA5SP180-201ENST00000516181 101 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 MIR4460-201ENST00000577862 86 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 AC079248.2-201ENST00000623779 326 ntBASIC-1.81□□□□□ -2.7
HMGN4O00479 SNORA72.3-201ENST00000365074 132 ntBASIC-1.82□□□□□ -2.7
HMGN4O00479 BX295541.1-201ENST00000417774 250 ntBASIC-1.82□□□□□ -2.7
HMGN4O00479 AL033528.1-201ENST00000453780 140 ntBASIC-1.82□□□□□ -2.7
HMGN4O00479 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.82□□□□□ -2.7
HMGN4O00479 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.82□□□□□ -2.7
HMGN4O00479 MIR4273-201ENST00000582824 84 ntBASIC-1.82□□□□□ -2.7
HMGN4O00479 AC124303.1-201ENST00000605703 360 ntBASIC-1.82□□□□□ -2.7
HMGN4O00479 AC019193.3-201ENST00000609144 554 ntBASIC-1.82□□□□□ -2.7
HMGN4O00479 MIR342-201ENST00000362212 99 ntBASIC-1.83□□□□□ -2.7
HMGN4O00479 RNU6-961P-201ENST00000363893 105 ntBASIC-1.83□□□□□ -2.7
HMGN4O00479 MIR617-201ENST00000385030 97 ntBASIC-1.83□□□□□ -2.7
HMGN4O00479 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.83□□□□□ -2.7
HMGN4O00479 TRAJ51-201ENST00000504127 63 ntBASIC-1.83□□□□□ -2.7
HMGN4O00479 RNU6-155P-201ENST00000516347 100 ntBASIC-1.83□□□□□ -2.7
HMGN4O00479 RNU7-149P-201ENST00000516739 59 ntBASIC-1.83□□□□□ -2.7
HMGN4O00479 MIR6841-201ENST00000637129 72 ntBASIC-1.83□□□□□ -2.7
HMGN4O00479 AC132825.6-201ENST00000638861 357 ntBASIC-1.83□□□□□ -2.7
HMGN4O00479 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 RNU6-596P-201ENST00000365395 98 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 MIR548A2-201ENST00000384956 97 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 SNORA40.3-201ENST00000390964 122 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.84□□□□□ -2.7
HMGN4O00479 RNU7-87P-201ENST00000459343 62 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 RNU6-693P-201ENST00000516134 107 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 SNORA18.6-201ENST00000516792 115 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 MIR5591-201ENST00000578248 65 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 RN7SKP299-201ENST00000606679 301 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 MIR8068-201ENST00000618032 68 ntBASIC-1.84□□□□□ -2.7
HMGN4O00479 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.85□□□□□ -2.71
HMGN4O00479 RNU6-226P-201ENST00000363778 107 ntBASIC-1.85□□□□□ -2.71
HMGN4O00479 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.85□□□□□ -2.71
HMGN4O00479 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.85□□□□□ -2.71
HMGN4O00479 SNORA36B-201ENST00000410438 131 ntBASIC-1.85□□□□□ -2.71
HMGN4O00479 AF228730.4-201ENST00000421457 183 ntBASIC-1.85□□□□□ -2.71
HMGN4O00479 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.85□□□□□ -2.71
HMGN4O00479 AC023449.1-201ENST00000454464 154 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms