Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 Y_RNA.512-201ENST00000384518 102 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 MIR140-201ENST00000385282 100 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 SNORA26-201ENST00000391286 122 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 AC113618.1-201ENST00000416747 285 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.48□□□□□ -2.33
SLC28A1O00337 RNU6-1338P-201ENST00000516328 91 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 RNU6-504P-201ENST00000516568 104 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 SNORD36C-201ENST00000516733 66 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 SCARNA24.2-201ENST00000516968 130 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
SLC28A1O00337 MIR4804-201ENST00000581683 73 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 MIR4676-201ENST00000583078 72 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.48□□□□□ -2.33
SLC28A1O00337 Z97988.1-201ENST00000637697 135 ntBASIC0.48□□□□□ -2.33
SLC28A1O00337 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
SLC28A1O00337 MIR548J-201ENST00000408833 112 ntBASIC0.47□□□□□ -2.33
SLC28A1O00337 RNU6-1203P-201ENST00000410703 110 ntBASIC0.47□□□□□ -2.33
SLC28A1O00337 HMGN1P33-201ENST00000432945 451 ntBASIC0.47□□□□□ -2.33
SLC28A1O00337 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.47□□□□□ -2.33
SLC28A1O00337 RNU6-570P-201ENST00000517051 105 ntBASIC0.47□□□□□ -2.33
SLC28A1O00337 MIR4714-201ENST00000580728 77 ntBASIC0.47□□□□□ -2.33
SLC28A1O00337 MIR8055-201ENST00000610739 97 ntBASIC0.47□□□□□ -2.33
SLC28A1O00337 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.47□□□□□ -2.33
SLC28A1O00337 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SLC28A1O00337 Y_RNA.66-201ENST00000362862 102 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 SNORA1.1-201ENST00000364671 133 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 Y_RNA.275-201ENST00000364726 110 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 RNU4-45P-201ENST00000365469 141 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 RNU6-1289P-201ENST00000384431 106 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 Y_RNA.604-201ENST00000410574 102 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 RNU6-1190P-201ENST00000410811 104 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 RN7SKP12-201ENST00000516275 143 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 RNU6-1299P-201ENST00000516316 100 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 Y_RNA.701-201ENST00000516812 110 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 MIR151B-201ENST00000584249 96 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 AP001282.2-201ENST00000616149 309 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 MIR6740-201ENST00000618268 113 ntBASIC0.46□□□□□ -2.34
SLC28A1O00337 AC010332.2-201ENST00000613083 1904 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SLC28A1O00337 Y_RNA.202-201ENST00000364083 110 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 MIR499A-201ENST00000384903 122 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 MIR626-201ENST00000385032 94 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 MT-TT-201ENST00000387460 66 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 MIR938-201ENST00000401216 83 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 MIR18B-201ENST00000454574 71 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 RNU7-96P-201ENST00000459535 64 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 MIR5000-201ENST00000577717 103 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 MIR3612-201ENST00000579753 87 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 AL356055.1-201ENST00000602528 446 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 AC020891.4-201ENST00000605745 93 ntBASIC0.45□□□□□ -2.34
SLC28A1O00337 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.44□□□□□ -2.34
SLC28A1O00337 MIR18A-201ENST00000362310 71 ntBASIC0.44□□□□□ -2.34
SLC28A1O00337 Y_RNA.91-201ENST00000363042 107 ntBASIC0.44□□□□□ -2.34
SLC28A1O00337 RNU6-797P-201ENST00000363101 109 ntBASIC0.44□□□□□ -2.34
SLC28A1O00337 SNORA33.2-201ENST00000365413 134 ntBASIC0.44□□□□□ -2.34
SLC28A1O00337 RNU6-484P-201ENST00000384016 107 ntBASIC0.44□□□□□ -2.34
SLC28A1O00337 MIR588-201ENST00000384900 83 ntBASIC0.44□□□□□ -2.34
SLC28A1O00337 RNU6-985P-201ENST00000410182 104 ntBASIC0.44□□□□□ -2.34
SLC28A1O00337 RNU2-70P-201ENST00000410718 179 ntBASIC0.44□□□□□ -2.34
SLC28A1O00337 RNU2-55P-201ENST00000411146 174 ntBASIC0.44□□□□□ -2.34
SLC28A1O00337 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
SLC28A1O00337 MIR376A2-201ENST00000636782 80 ntBASIC0.44□□□□□ -2.34
SLC28A1O00337 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
SLC28A1O00337 RNA5SP499-201ENST00000363982 119 ntBASIC0.43□□□□□ -2.34
SLC28A1O00337 snoU2_19.4-201ENST00000364329 80 ntBASIC0.43□□□□□ -2.34
SLC28A1O00337 MIR548I3-201ENST00000408378 149 ntBASIC0.43□□□□□ -2.34
SLC28A1O00337 RNU6-1165P-201ENST00000410119 107 ntBASIC0.43□□□□□ -2.34
SLC28A1O00337 RNU6-602P-201ENST00000411155 105 ntBASIC0.43□□□□□ -2.34
SLC28A1O00337 AC092628.1-201ENST00000436250 252 ntBASIC0.43□□□□□ -2.34
SLC28A1O00337 AF228730.3-201ENST00000436691 102 ntBASIC0.43□□□□□ -2.34
SLC28A1O00337 AL138752.1-201ENST00000452964 351 ntBASIC0.43□□□□□ -2.34
SLC28A1O00337 RNU7-56P-201ENST00000458744 62 ntBASIC0.43□□□□□ -2.34
SLC28A1O00337 RNU6-453P-201ENST00000516819 85 ntBASIC0.43□□□□□ -2.34
SLC28A1O00337 Y_RNA.44-201ENST00000362676 108 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 RNU6-1309P-201ENST00000363305 108 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 Y_RNA.237-201ENST00000364439 102 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 RNU6-740P-201ENST00000364734 105 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 Y_RNA.634-201ENST00000364811 113 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 Y_RNA.410-201ENST00000383992 113 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 Y_RNA.432-201ENST00000384087 111 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 RNY3P5-201ENST00000384127 102 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 SNORD77.3-201ENST00000391113 65 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.42□□□□□ -2.34
SLC28A1O00337 RNU2-11P-201ENST00000459191 187 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.42□□□□□ -2.34
SLC28A1O00337 RNU6-998P-201ENST00000515894 101 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 RNA5SP153-201ENST00000516498 76 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 AL078603.1-201ENST00000603824 313 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 AL162730.1-201ENST00000605734 292 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.42□□□□□ -2.34
SLC28A1O00337 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
SLC28A1O00337 Y_RNA.7-201ENST00000362352 102 ntBASIC0.41□□□□□ -2.34
SLC28A1O00337 Y_RNA.224-201ENST00000364308 111 ntBASIC0.41□□□□□ -2.34
SLC28A1O00337 RNU6-1189P-201ENST00000383958 107 ntBASIC0.41□□□□□ -2.34
SLC28A1O00337 RNU6-364P-201ENST00000384387 107 ntBASIC0.41□□□□□ -2.34
SLC28A1O00337 RNU6-1228P-201ENST00000391014 107 ntBASIC0.41□□□□□ -2.34
SLC28A1O00337 MIR1257-201ENST00000408490 117 ntBASIC0.41□□□□□ -2.34
SLC28A1O00337 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.41□□□□□ -2.34
SLC28A1O00337 SNORD2.1-201ENST00000458762 69 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 228 ms