Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 SRIP3-201ENST00000413200 219 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 AC108667.1-201ENST00000428618 249 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 AC087499.4-201ENST00000448505 178 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 RNU7-80P-201ENST00000459562 61 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 RNU6-998P-201ENST00000515894 101 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 RNU6-65P-201ENST00000516332 98 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 SNORA31.15-201ENST00000516771 132 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 IGLL4P-201ENST00000614590 133 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 AC010297.1-201ENST00000623948 149 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 MIR3202-2-201ENST00000635980 79 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 MIR219B-201ENST00000637023 88 ntBASIC2.41□□□□□ -2.02
RFXAPO00287 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RFXAPO00287 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.4□□□□□ -2.03
RFXAPO00287 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.4□□□□□ -2.03
RFXAPO00287 RNU6-219P-201ENST00000364728 107 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 RNU6-60P-201ENST00000364792 103 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 Y_RNA.313-201ENST00000365095 103 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 SNORD115-35-201ENST00000365122 82 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 RNU1-109P-201ENST00000383960 147 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 RNU6-409P-201ENST00000384114 104 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 Y_RNA.470-201ENST00000384307 117 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 RNU11-5P-201ENST00000391216 129 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 SNORA26.9-201ENST00000391322 122 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 RNU6-1190P-201ENST00000410811 104 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 CST2P1-201ENST00000425770 87 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 SNORA31.10-201ENST00000516482 106 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 MIR5007-201ENST00000583098 95 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.4□□□□□ -2.03
RFXAPO00287 MIR6845-201ENST00000613182 61 ntBASIC2.4□□□□□ -2.03
RFXAPO00287 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.4□□□□□ -2.03
RFXAPO00287 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
RFXAPO00287 Y_RNA.99-201ENST00000363138 105 ntBASIC2.39□□□□□ -2.03
RFXAPO00287 RNA5SP493-201ENST00000364115 91 ntBASIC2.39□□□□□ -2.03
RFXAPO00287 RNU6-979P-201ENST00000383896 107 ntBASIC2.39□□□□□ -2.03
RFXAPO00287 AL451046.2-201ENST00000403074 277 ntBASIC2.39□□□□□ -2.03
RFXAPO00287 AC096949.1-201ENST00000412047 152 ntBASIC2.39□□□□□ -2.03
RFXAPO00287 HSPE1P9-201ENST00000440046 311 ntBASIC2.39□□□□□ -2.03
RFXAPO00287 AC069257.2-201ENST00000441819 155 ntBASIC2.39□□□□□ -2.03
RFXAPO00287 RNU7-94P-201ENST00000459576 63 ntBASIC2.39□□□□□ -2.03
RFXAPO00287 SEM1P1-201ENST00000506694 209 ntBASIC2.39□□□□□ -2.03
RFXAPO00287 MIR3169-201ENST00000578032 83 ntBASIC2.39□□□□□ -2.03
RFXAPO00287 MIR5588-201ENST00000581890 63 ntBASIC2.39□□□□□ -2.03
RFXAPO00287 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
RFXAPO00287 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
RFXAPO00287 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RFXAPO00287 SNORD115-13-201ENST00000363358 82 ntBASIC2.38□□□□□ -2.03
RFXAPO00287 SNORD115-16-201ENST00000363887 82 ntBASIC2.38□□□□□ -2.03
RFXAPO00287 SNORD115-1-201ENST00000364961 82 ntBASIC2.38□□□□□ -2.03
RFXAPO00287 Y_RNA.454-201ENST00000384224 113 ntBASIC2.38□□□□□ -2.03
RFXAPO00287 AL627390.1-201ENST00000396055 340 ntBASIC2.38□□□□□ -2.03
RFXAPO00287 AL022718.1-201ENST00000412004 84 ntBASIC2.38□□□□□ -2.03
RFXAPO00287 RNU2-11P-201ENST00000459191 187 ntBASIC2.38□□□□□ -2.03
RFXAPO00287 AC024995.1-201ENST00000523014 93 ntBASIC2.38□□□□□ -2.03
RFXAPO00287 MIR5092-201ENST00000583139 88 ntBASIC2.38□□□□□ -2.03
RFXAPO00287 MIR548AE2-201ENST00000583456 67 ntBASIC2.38□□□□□ -2.03
RFXAPO00287 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.38□□□□□ -2.03
RFXAPO00287 AC007336.1-201ENST00000576365 3828 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.37□□□□□ -2.03
RFXAPO00287 Y_RNA.247-201ENST00000364500 92 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 Y_RNA.355-201ENST00000365462 98 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 SNORD21-201ENST00000383953 95 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 RNU6-1201P-201ENST00000384227 107 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 RNU6-163P-201ENST00000384396 106 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 RNU6-160P-201ENST00000384591 107 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 MIR561-201ENST00000385216 97 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 SNORA17.3-201ENST00000391159 129 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 RNA5SP482-201ENST00000391269 118 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 MRPL35P3-201ENST00000421557 364 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 AL035398.1-201ENST00000430869 322 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.37□□□□□ -2.03
RFXAPO00287 RPL23AP63-201ENST00000498752 471 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 AC022202.1-201ENST00000613515 211 ntBASIC2.37□□□□□ -2.03
RFXAPO00287 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
RFXAPO00287 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
RFXAPO00287 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RFXAPO00287 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RFXAPO00287 Y_RNA.10-201ENST00000362371 110 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 Y_RNA.95-201ENST00000363079 95 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 SNORD115-3-201ENST00000363100 82 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 DEFA7P-201ENST00000382676 285 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 Y_RNA.508-201ENST00000384502 114 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 AC092427.1-202ENST00000430569 476 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 RNU7-96P-201ENST00000459535 64 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 RPS29P12-201ENST00000460178 152 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 RNA5SP445-201ENST00000515889 115 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 Y_RNA.659-201ENST00000515994 113 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 RNU6-521P-201ENST00000516663 105 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.36□□□□□ -2.03
RFXAPO00287 AC067747.1-201ENST00000608026 250 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 MIR8054-201ENST00000620877 86 ntBASIC2.36□□□□□ -2.03
RFXAPO00287 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RFXAPO00287 MIR6073-201ENST00000352083 89 ntBASIC2.35□□□□□ -2.03
RFXAPO00287 RNA5SP139-201ENST00000364340 117 ntBASIC2.35□□□□□ -2.03
RFXAPO00287 RNU6-242P-201ENST00000384359 107 ntBASIC2.35□□□□□ -2.03
RFXAPO00287 RNU6-1307P-201ENST00000391012 103 ntBASIC2.35□□□□□ -2.03
RFXAPO00287 U8.16-201ENST00000391279 133 ntBASIC2.35□□□□□ -2.03
RFXAPO00287 RNU4-69P-201ENST00000410677 143 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms