Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.32□□□□□ -2.36
DDX39AO00148 MIR8055-201ENST00000610739 97 ntBASIC0.32□□□□□ -2.36
DDX39AO00148 SNORD38B-202ENST00000625943 69 ntBASIC0.32□□□□□ -2.36
DDX39AO00148 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
DDX39AO00148 Y_RNA.28-201ENST00000362554 111 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 Y_RNA.37-201ENST00000362606 108 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 Y_RNA.389-201ENST00000383924 113 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 RNU6-514P-201ENST00000384208 107 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 RNU6-662P-201ENST00000384253 104 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 MIR526A2-201ENST00000390198 65 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 RNU7-56P-201ENST00000458744 62 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 RNU6-693P-201ENST00000516134 107 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 RNU7-53P-201ENST00000516705 60 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 Y_RNA.721-201ENST00000517207 102 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 MIR6740-201ENST00000618268 113 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 Z97988.1-201ENST00000637697 135 ntBASIC0.31□□□□□ -2.36
DDX39AO00148 AC010332.2-201ENST00000613083 1904 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 MIR330-201ENST00000362196 94 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 snoU2_19.2-201ENST00000363024 80 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 RNU6-326P-201ENST00000365480 107 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 SNORD24-201ENST00000383884 75 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 SNORD61-201ENST00000384252 73 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 SNORA27-201ENST00000384323 126 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 Y_RNA.541-201ENST00000384640 113 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 MIR548A2-201ENST00000384956 97 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 SNORA53-201ENST00000391141 249 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 HMGN1P33-201ENST00000432945 451 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 MIR18B-201ENST00000454574 71 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 SNORD36C-201ENST00000516733 66 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 SNORA40.15-201ENST00000516884 107 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 AC037487.3-201ENST00000606668 112 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 AL008718.3-201ENST00000610217 321 ntBASIC0.3□□□□□ -2.36
DDX39AO00148 Y_RNA.217-201ENST00000364214 105 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 Y_RNA.380-201ENST00000365663 111 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 MIR215-201ENST00000384858 110 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 MIR588-201ENST00000384900 83 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 SNORD71-201ENST00000411292 86 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 AC022028.1-201ENST00000412054 408 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 ELOCP20-201ENST00000422460 345 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 AL358176.2-201ENST00000425769 204 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 Y_RNA.641-201ENST00000459414 105 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 RPS29P24-201ENST00000486345 171 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 Y_RNA.802-201ENST00000614892 130 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 snoU18.1-201ENST00000629629 71 ntBASIC0.29□□□□□ -2.36
DDX39AO00148 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.28□□□□□ -2.36
DDX39AO00148 Y_RNA.85-201ENST00000363014 111 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 Y_RNA.214-201ENST00000364201 112 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 RNU4-10P-201ENST00000364383 140 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 RNU6-474P-201ENST00000384243 107 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 RNU6-364P-201ENST00000384387 107 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 Y_RNA.509-201ENST00000384506 99 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 RNU6-679P-201ENST00000391003 106 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 RNU6-1165P-201ENST00000410119 107 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 RPL21P38-201ENST00000418090 167 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 SNORA25.12-201ENST00000516202 82 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 SNORA27.4-201ENST00000516650 95 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 RNU6-1270P-201ENST00000517128 108 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 RNU6-988P-201ENST00000519081 107 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 AC100767.1-201ENST00000528178 123 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 MIR8087-201ENST00000612745 78 ntBASIC0.28□□□□□ -2.36
DDX39AO00148 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.27□□□□□ -2.37
DDX39AO00148 Y_RNA.19-201ENST00000362462 99 ntBASIC0.27□□□□□ -2.37
DDX39AO00148 RNU6-888P-201ENST00000363010 101 ntBASIC0.27□□□□□ -2.37
DDX39AO00148 RNU6-770P-201ENST00000363929 105 ntBASIC0.27□□□□□ -2.37
DDX39AO00148 MIR1257-201ENST00000408490 117 ntBASIC0.27□□□□□ -2.37
DDX39AO00148 RNU6-602P-201ENST00000411155 105 ntBASIC0.27□□□□□ -2.37
DDX39AO00148 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.27□□□□□ -2.37
DDX39AO00148 snoU13.2-201ENST00000459201 104 ntBASIC0.27□□□□□ -2.37
DDX39AO00148 Y_RNA.631-201ENST00000459607 101 ntBASIC0.27□□□□□ -2.37
DDX39AO00148 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.27□□□□□ -2.37
DDX39AO00148 RNU6-126P-201ENST00000516685 103 ntBASIC0.27□□□□□ -2.37
DDX39AO00148 RNU6-365P-201ENST00000517113 106 ntBASIC0.27□□□□□ -2.37
DDX39AO00148 MIR5688-201ENST00000580619 83 ntBASIC0.27□□□□□ -2.37
DDX39AO00148 uc_338.16-201ENST00000621804 95 ntBASIC0.27□□□□□ -2.37
DDX39AO00148 RNU6-1309P-201ENST00000363305 108 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 RNA5SP457-201ENST00000363657 124 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 SNORA1.1-201ENST00000364671 133 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 Y_RNA.276-201ENST00000364732 109 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 RNU6-806P-201ENST00000365147 105 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 RNU6-716P-201ENST00000365621 103 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 MIR125B2-201ENST00000385128 89 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 SNORD100-201ENST00000408573 76 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 RNU6-1190P-201ENST00000410811 104 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 SNORA40.8-201ENST00000411034 126 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 AL731563.1-201ENST00000442202 214 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 RNU7-102P-201ENST00000458948 62 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 RNU7-185P-201ENST00000459215 60 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 RNY3P15-201ENST00000516297 97 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 AC131281.1-201ENST00000522984 164 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 AC090897.1-201ENST00000580909 226 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 AC006006.1-201ENST00000603082 144 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 AC008608.1-201ENST00000603910 127 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 MTND4P29-201ENST00000503122 1372 ntBASIC0.26□□□□□ -2.37
DDX39AO00148 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.26□□□□□ -2.37
DDX39AO00148 Y_RNA.16-201ENST00000362421 102 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 Y_RNA.24-201ENST00000362508 103 ntBASIC0.25□□□□□ -2.37
DDX39AO00148 Y_RNA.26-201ENST00000362539 101 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms