Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 RNU6-1211P-201ENST00000459179 105 ntBASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-998P-201ENST00000515894 101 ntBASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU7-41P-201ENST00000515917 61 ntBASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 SNORA44.1-201ENST00000517031 108 ntBASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR3198-2-201ENST00000577868 80 ntBASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR4764-201ENST00000580680 88 ntBASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 HSPE1P19-201ENST00000603327 295 ntBASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR502-201ENST00000606349 86 ntBASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR4791-201ENST00000607666 84 ntBASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-349P-201ENST00000362402 107 ntBASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 Y_RNA.114-201ENST00000363265 113 ntBASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 Y_RNA.351-201ENST00000365436 96 ntBASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AL606753.1-201ENST00000427435 87 ntBASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RPS29P24-201ENST00000486345 171 ntBASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AC019176.1-201ENST00000518519 225 ntBASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR4285-201ENST00000581001 85 ntBASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR3192-201ENST00000584920 77 ntBASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AC011603.4-201ENST00000611325 277 ntBASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 TUG1_4.1-201ENST00000619464 181 ntBASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.32□□□□□ -2.2
SAA2-SAA4A0A096LPE2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR342-201ENST00000362212 99 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 Y_RNA.71-201ENST00000362892 104 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR504-201ENST00000385065 83 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-913P-201ENST00000390913 95 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 SNORA25.15-201ENST00000516487 89 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU7-43P-201ENST00000516554 64 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 Y_RNA.692-201ENST00000516627 105 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR4255-201ENST00000579351 72 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AL513534.2-201ENST00000603836 250 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AL096861.1-201ENST00000610899 123 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AC008133.2-201ENST00000624540 351 ntBASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.31□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AL596211.1-201ENST00000569873 2277 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-235P-201ENST00000362644 107 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 SNORA1.2-201ENST00000365189 134 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AL451046.2-201ENST00000403074 277 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-1190P-201ENST00000410811 104 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 SNX2P2-201ENST00000424553 323 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RPS27P16-201ENST00000425758 201 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AC027119.1-201ENST00000440877 241 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RPS29P29-201ENST00000456396 171 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU7-107P-201ENST00000459121 61 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU2-11P-201ENST00000459191 187 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU7-45P-201ENST00000459460 63 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU7-96P-201ENST00000459535 64 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR3945-201ENST00000581853 98 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AL365222.1-201ENST00000614661 98 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AC243994.1-201ENST00000618627 109 ntBASIC1.3□□□□□ -2.2
SAA2-SAA4A0A096LPE2 SNORD18B-201ENST00000365659 72 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 Y_RNA.537-201ENST00000384626 109 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR520C-201ENST00000385005 87 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MTATP6P21-201ENST00000440681 189 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AL158147.1-201ENST00000443970 75 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AC079140.2-201ENST00000506193 142 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-322P-201ENST00000516010 103 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-240P-201ENST00000516098 97 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 SNORD111.1-201ENST00000516421 86 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-958P-201ENST00000516995 106 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-165P-201ENST00000517170 99 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 BX248123.2-201ENST00000606318 124 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 GHRLOS.1-201ENST00000610995 70 ntBASIC1.29□□□□□ -2.2
SAA2-SAA4A0A096LPE2 Y_RNA.261-201ENST00000364631 102 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU1-133P-201ENST00000364867 167 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 Y_RNA.366-201ENST00000365540 102 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR539-201ENST00000365690 78 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-22P-201ENST00000384355 107 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 SNORA26.6-201ENST00000391256 115 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 SNORA26.9-201ENST00000391322 122 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 MIR1289-2-201ENST00000408360 111 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 Y_RNA.617-201ENST00000410920 90 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 AL035398.1-201ENST00000430869 322 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 snoU13.15-201ENST00000459407 104 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU5E-3P-201ENST00000515913 68 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-781P-201ENST00000516377 101 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 RNU6-659P-201ENST00000516454 104 ntBASIC1.28□□□□□ -2.2
SAA2-SAA4A0A096LPE2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
SAA2-SAA4A0A096LPE2 Y_RNA.127-201ENST00000363386 109 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 RNU4-16P-201ENST00000364737 141 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 RNY1P6-201ENST00000384193 109 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 RNU6-80P-201ENST00000384195 107 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 RNU6-1117P-201ENST00000384525 104 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 Y_RNA.630-201ENST00000411370 108 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 RNU7-73P-201ENST00000458743 63 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 RNU7-67P-201ENST00000459003 62 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 RNU7-80P-201ENST00000459562 61 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 Y_RNA.757-201ENST00000578934 114 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 MIR3664-201ENST00000579074 99 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 MIR548AO-201ENST00000579992 96 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 MIR3683-201ENST00000580847 82 ntBASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.27□□□□□ -2.21
SAA2-SAA4A0A096LPE2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SAA2-SAA4A0A096LPE2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms