Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 SNORA7.4-201ENST00000384249 137 ntBASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 Y_RNA.510-201ENST00000384511 114 ntBASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 Y_RNA.537-201ENST00000384626 109 ntBASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 RNA5SP465-201ENST00000391195 109 ntBASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 AC008885.1-201ENST00000514930 301 ntBASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 RNA5SP137-201ENST00000516833 135 ntBASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
HRH3Q9Y5N1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.87□□□□□ -1.95
HRH3Q9Y5N1 SNORD67-201ENST00000390833 111 ntBASIC2.87□□□□□ -1.95
HRH3Q9Y5N1 U8.15-201ENST00000390947 134 ntBASIC2.87□□□□□ -1.95
HRH3Q9Y5N1 COTL1P1-201ENST00000422309 375 ntBASIC2.87□□□□□ -1.95
HRH3Q9Y5N1 Z96811.1-201ENST00000445880 108 ntBASIC2.87□□□□□ -1.95
HRH3Q9Y5N1 snoU13.16-201ENST00000459350 104 ntBASIC2.87□□□□□ -1.95
HRH3Q9Y5N1 RNU7-2P-201ENST00000516096 62 ntBASIC2.87□□□□□ -1.95
HRH3Q9Y5N1 RNA5SP481-201ENST00000516814 122 ntBASIC2.87□□□□□ -1.95
HRH3Q9Y5N1 MIR4668-201ENST00000582284 70 ntBASIC2.87□□□□□ -1.95
HRH3Q9Y5N1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.87□□□□□ -1.95
HRH3Q9Y5N1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.87□□□□□ -1.95
HRH3Q9Y5N1 AC073325.2-201ENST00000339545 159 ntBASIC2.86□□□□□ -1.95
HRH3Q9Y5N1 SNORD58A-201ENST00000383875 65 ntBASIC2.86□□□□□ -1.95
HRH3Q9Y5N1 RNU6-979P-201ENST00000383896 107 ntBASIC2.86□□□□□ -1.95
HRH3Q9Y5N1 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.86□□□□□ -1.95
HRH3Q9Y5N1 RNU7-26P-201ENST00000458980 63 ntBASIC2.86□□□□□ -1.95
HRH3Q9Y5N1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HRH3Q9Y5N1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.86□□□□□ -1.95
HRH3Q9Y5N1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 SNORD38.1-201ENST00000363863 68 ntBASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 Y_RNA.437-201ENST00000384113 113 ntBASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 MIR660-201ENST00000385235 97 ntBASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 RNU6-913P-201ENST00000390913 95 ntBASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 RNU6-1190P-201ENST00000410811 104 ntBASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 AC245047.7-201ENST00000440265 293 ntBASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 RPS29P28-201ENST00000446439 141 ntBASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 MIR1270-201ENST00000459320 83 ntBASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 RPL23AP94-201ENST00000512518 302 ntBASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 MIR376B-201ENST00000614515 100 ntBASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HRH3Q9Y5N1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 Y_RNA.244-201ENST00000364484 109 ntBASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 RNU1-148P-201ENST00000384472 162 ntBASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 RNY1P4-201ENST00000384595 115 ntBASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 SNORD28B-201ENST00000390993 75 ntBASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 RPL32P35-201ENST00000415214 394 ntBASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 RNU7-171P-201ENST00000459581 62 ntBASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 RNU6-267P-201ENST00000516714 103 ntBASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 ELOCP29-201ENST00000588193 334 ntBASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 AL137790.1-201ENST00000634283 177 ntBASIC2.84□□□□□ -1.95
HRH3Q9Y5N1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.84□□□□□ -1.96
HRH3Q9Y5N1 AC093010.3-201ENST00000570269 15214 ntBASIC2.84□□□□□ -1.96
HRH3Q9Y5N1 RNU6-219P-201ENST00000364728 107 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 Y_RNA.620-201ENST00000411009 88 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 AC090844.1-201ENST00000422019 156 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 HMGN2P3-201ENST00000433603 273 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 HMGN2P5-201ENST00000436882 273 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 RPL23AP6-201ENST00000446637 472 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 snoU13.27-201ENST00000459278 104 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 MIR4666B-201ENST00000578142 81 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 FAM106DP-201ENST00000586416 501 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 AC021506.2-201ENST00000612354 169 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 AC073476.4-201ENST00000628409 72 ntBASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HRH3Q9Y5N1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 RNU6-865P-201ENST00000364772 107 ntBASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 RNU6-279P-201ENST00000391297 101 ntBASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 AL445685.2-201ENST00000422551 342 ntBASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 UBE2DNL-203ENST00000474922 222 ntBASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 RNA5SP395-201ENST00000516567 118 ntBASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 RNU6-86P-201ENST00000606534 107 ntBASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 MIR6733-201ENST00000635723 61 ntBASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HRH3Q9Y5N1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 AL365361.1-201ENST00000566942 3481 ntBASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 SNORA48.1-201ENST00000390879 135 ntBASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 Y_RNA.611-201ENST00000410682 108 ntBASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 UBBP3-201ENST00000445497 241 ntBASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 RNA5SP217-201ENST00000515959 91 ntBASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 RNVU1-2-201ENST00000516326 135 ntBASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 AC103810.7-201ENST00000607821 91 ntBASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
HRH3Q9Y5N1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
HRH3Q9Y5N1 Y_RNA.140-201ENST00000363474 103 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms