Protein–RNA interactions for Protein: Q9Y5I3

PCDHA1, Protocadherin alpha-1, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1Q9Y5I3 AF228730.3-201ENST00000436691 102 ntBASIC1.76□□□□□ -2.13
PCDHA1Q9Y5I3 AC092991.1-201ENST00000477176 376 ntBASIC1.76□□□□□ -2.13
PCDHA1Q9Y5I3 AL512598.1-201ENST00000610158 273 ntBASIC1.76□□□□□ -2.13
PCDHA1Q9Y5I3 Y_RNA.778-201ENST00000620203 90 ntBASIC1.76□□□□□ -2.13
PCDHA1Q9Y5I3 MIR8063-201ENST00000621930 81 ntBASIC1.76□□□□□ -2.13
PCDHA1Q9Y5I3 MIR6844-201ENST00000637122 62 ntBASIC1.76□□□□□ -2.13
PCDHA1Q9Y5I3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PCDHA1Q9Y5I3 Y_RNA.170-201ENST00000363746 110 ntBASIC1.75□□□□□ -2.13
PCDHA1Q9Y5I3 SNORD116-18-201ENST00000383961 92 ntBASIC1.75□□□□□ -2.13
PCDHA1Q9Y5I3 MIR624-201ENST00000385217 97 ntBASIC1.75□□□□□ -2.13
PCDHA1Q9Y5I3 SNORD77.3-201ENST00000391113 65 ntBASIC1.75□□□□□ -2.13
PCDHA1Q9Y5I3 SNORA75.5-201ENST00000391291 81 ntBASIC1.75□□□□□ -2.13
PCDHA1Q9Y5I3 MIR934-201ENST00000401241 83 ntBASIC1.75□□□□□ -2.13
PCDHA1Q9Y5I3 SNORA74.3-201ENST00000517108 154 ntBASIC1.75□□□□□ -2.13
PCDHA1Q9Y5I3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.75□□□□□ -2.13
PCDHA1Q9Y5I3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
PCDHA1Q9Y5I3 WWP1P1-201ENST00000466609 2769 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 Y_RNA.8-201ENST00000362353 102 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 RNY1P5-201ENST00000383890 115 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 AL451046.2-201ENST00000403074 277 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 RNA5SP127-201ENST00000411051 133 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 RNU6-938P-201ENST00000411285 103 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 AC027119.1-201ENST00000440877 241 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 SNORD123-201ENST00000459473 70 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 AC079140.2-201ENST00000506193 142 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 RNU7-200P-201ENST00000516105 62 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 MIR3129-201ENST00000581095 76 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 MIR3658-201ENST00000636291 56 ntBASIC1.74□□□□□ -2.13
PCDHA1Q9Y5I3 SNORA1.2-201ENST00000365189 134 ntBASIC1.73□□□□□ -2.13
PCDHA1Q9Y5I3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.73□□□□□ -2.13
PCDHA1Q9Y5I3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.73□□□□□ -2.13
PCDHA1Q9Y5I3 RNU7-95P-201ENST00000459222 64 ntBASIC1.73□□□□□ -2.13
PCDHA1Q9Y5I3 MTND5P41-201ENST00000517498 206 ntBASIC1.73□□□□□ -2.13
PCDHA1Q9Y5I3 MIR4422-201ENST00000581938 83 ntBASIC1.73□□□□□ -2.13
PCDHA1Q9Y5I3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.73□□□□□ -2.13
PCDHA1Q9Y5I3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.73□□□□□ -2.13
PCDHA1Q9Y5I3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 RNU6-151P-201ENST00000364158 107 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 RNU6-1082P-201ENST00000364574 107 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 Y_RNA.400-201ENST00000383963 111 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 SNORA40.5-201ENST00000391061 128 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 MIR1304-201ENST00000408243 91 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 SNX2P2-201ENST00000424553 323 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 AC245517.4-201ENST00000448601 281 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 SNORA18.7-201ENST00000516910 131 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 SNORA31.24-201ENST00000517232 57 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 AP003484.1-201ENST00000530974 250 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 AL365434.2-201ENST00000607979 234 ntBASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PCDHA1Q9Y5I3 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
PCDHA1Q9Y5I3 Y_RNA.506-201ENST00000384494 102 ntBASIC1.71□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD41-201ENST00000386967 70 ntBASIC1.71□□□□□ -2.14
PCDHA1Q9Y5I3 SNORA18.4-201ENST00000516440 124 ntBASIC1.71□□□□□ -2.14
PCDHA1Q9Y5I3 RNU7-43P-201ENST00000516554 64 ntBASIC1.71□□□□□ -2.14
PCDHA1Q9Y5I3 MIR548AR-201ENST00000582191 57 ntBASIC1.71□□□□□ -2.14
PCDHA1Q9Y5I3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.71□□□□□ -2.14
PCDHA1Q9Y5I3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.71□□□□□ -2.14
PCDHA1Q9Y5I3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-34-201ENST00000362441 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-12-201ENST00000362583 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-29-201ENST00000362834 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-9-201ENST00000362912 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-21-201ENST00000362963 81 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-14-201ENST00000363090 81 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-13-201ENST00000363358 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-41-201ENST00000363608 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-11-201ENST00000363616 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-5-201ENST00000363633 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-39-201ENST00000363694 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-4-201ENST00000363810 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-16-201ENST00000363887 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-6-201ENST00000363942 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-42-201ENST00000364273 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-15-201ENST00000364809 81 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-1-201ENST00000364961 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-26-201ENST00000365067 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-10-201ENST00000365073 81 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-43-201ENST00000365503 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-36-201ENST00000365629 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD37.2-201ENST00000391075 66 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 RNU6-588P-201ENST00000410281 105 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 RNU2-13P-201ENST00000515909 113 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 RNU7-181P-201ENST00000517234 74 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 AC112693.2-201ENST00000556538 232 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 MIR5197-201ENST00000583721 112 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 AL357312.1-201ENST00000603879 298 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SNORD115-40-201ENST00000606510 82 ntBASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDHA1Q9Y5I3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
PCDHA1Q9Y5I3 RNU6-818P-201ENST00000364837 108 ntBASIC1.69□□□□□ -2.14
PCDHA1Q9Y5I3 RNU4-11P-201ENST00000365287 132 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms