Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 Y_RNA.494-201ENST00000384432 111 ntBASIC2.69□□□□□ -1.98
BRPF3Q9ULD4 RNA5SP57-201ENST00000459463 123 ntBASIC2.69□□□□□ -1.98
BRPF3Q9ULD4 UBE2DNL-203ENST00000474922 222 ntBASIC2.69□□□□□ -1.98
BRPF3Q9ULD4 RNA5SP281-201ENST00000516504 135 ntBASIC2.69□□□□□ -1.98
BRPF3Q9ULD4 AC090821.2-201ENST00000523552 176 ntBASIC2.69□□□□□ -1.98
BRPF3Q9ULD4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.69□□□□□ -1.98
BRPF3Q9ULD4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
BRPF3Q9ULD4 Y_RNA.35-201ENST00000362601 101 ntBASIC2.68□□□□□ -1.98
BRPF3Q9ULD4 RNU6-360P-201ENST00000390944 104 ntBASIC2.68□□□□□ -1.98
BRPF3Q9ULD4 MIR6766-201ENST00000622641 72 ntBASIC2.68□□□□□ -1.98
BRPF3Q9ULD4 WWP1P1-201ENST00000466609 2769 ntBASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 RNA5SP276-201ENST00000362580 94 ntBASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 RNU6-153P-201ENST00000364422 104 ntBASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 SNORA1.2-201ENST00000365189 134 ntBASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 RNU7-96P-201ENST00000459535 64 ntBASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 RPS29P24-201ENST00000486345 171 ntBASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 COX6CP6-201ENST00000490840 228 ntBASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 PDCD5P2-201ENST00000507570 312 ntBASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
BRPF3Q9ULD4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 RNA5SP160-201ENST00000364866 120 ntBASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 SNORA22-201ENST00000383907 134 ntBASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 RNU6-880P-201ENST00000384526 107 ntBASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 MIR526A1-201ENST00000384897 85 ntBASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 AC107297.1-201ENST00000459991 176 ntBASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 AC008413.1-201ENST00000511864 177 ntBASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 RNU6-998P-201ENST00000515894 101 ntBASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 RNY4P20-201ENST00000516678 93 ntBASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 AC021443.1-201ENST00000604478 211 ntBASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 uc_338.20-201ENST00000621563 178 ntBASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
BRPF3Q9ULD4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.65□□□□□ -1.98
BRPF3Q9ULD4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
BRPF3Q9ULD4 Y_RNA.370-201ENST00000365589 108 ntBASIC2.65□□□□□ -1.99
BRPF3Q9ULD4 AC063976.4-201ENST00000421971 163 ntBASIC2.65□□□□□ -1.99
BRPF3Q9ULD4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.65□□□□□ -1.99
BRPF3Q9ULD4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
BRPF3Q9ULD4 MIR570-201ENST00000384917 97 ntBASIC2.64□□□□□ -1.99
BRPF3Q9ULD4 RNA5SP364-201ENST00000516938 78 ntBASIC2.64□□□□□ -1.99
BRPF3Q9ULD4 SNORA44.1-201ENST00000517031 108 ntBASIC2.64□□□□□ -1.99
BRPF3Q9ULD4 HSPE1P19-201ENST00000603327 295 ntBASIC2.64□□□□□ -1.99
BRPF3Q9ULD4 MIR302B-201ENST00000362188 73 ntBASIC2.63□□□□□ -1.99
BRPF3Q9ULD4 RNU6-457P-201ENST00000363999 107 ntBASIC2.63□□□□□ -1.99
BRPF3Q9ULD4 RNA5SP37-201ENST00000365420 130 ntBASIC2.63□□□□□ -1.99
BRPF3Q9ULD4 AL035398.1-201ENST00000430869 322 ntBASIC2.63□□□□□ -1.99
BRPF3Q9ULD4 RNU7-164P-201ENST00000459221 62 ntBASIC2.63□□□□□ -1.99
BRPF3Q9ULD4 SNORA59A-201ENST00000459326 152 ntBASIC2.63□□□□□ -1.99
BRPF3Q9ULD4 RNA5SP24-201ENST00000516478 95 ntBASIC2.63□□□□□ -1.99
BRPF3Q9ULD4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.63□□□□□ -1.99
BRPF3Q9ULD4 MIR4713-201ENST00000582691 75 ntBASIC2.63□□□□□ -1.99
BRPF3Q9ULD4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 RNU6-755P-201ENST00000364400 103 ntBASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 RNU4-16P-201ENST00000364737 141 ntBASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 Y_RNA.298-201ENST00000364960 107 ntBASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 RNU6-203P-201ENST00000384038 104 ntBASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 MIR221-201ENST00000385135 110 ntBASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 RNU4-53P-201ENST00000410828 140 ntBASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 HMGN2P19-201ENST00000425149 265 ntBASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 RNU2-11P-201ENST00000459191 187 ntBASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 SNORD123-201ENST00000459473 70 ntBASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 SUMO2P16-201ENST00000519475 264 ntBASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 MIR4305-201ENST00000583252 102 ntBASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.62□□□□□ -1.99
BRPF3Q9ULD4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.61□□□□□ -1.99
BRPF3Q9ULD4 Y_RNA.198-201ENST00000364013 98 ntBASIC2.61□□□□□ -1.99
BRPF3Q9ULD4 RNA5SP489-201ENST00000410986 109 ntBASIC2.61□□□□□ -1.99
BRPF3Q9ULD4 UBL5P3-201ENST00000475112 231 ntBASIC2.61□□□□□ -1.99
BRPF3Q9ULD4 SNORA31.4-201ENST00000516049 129 ntBASIC2.61□□□□□ -1.99
BRPF3Q9ULD4 MIR5002-201ENST00000584713 97 ntBASIC2.61□□□□□ -1.99
BRPF3Q9ULD4 FAM106DP-201ENST00000586416 501 ntBASIC2.61□□□□□ -1.99
BRPF3Q9ULD4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
BRPF3Q9ULD4 SNORA70.7-201ENST00000384159 133 ntBASIC2.6□□□□□ -1.99
BRPF3Q9ULD4 RNU7-123P-201ENST00000515911 60 ntBASIC2.6□□□□□ -1.99
BRPF3Q9ULD4 AC007012.1-201ENST00000567192 175 ntBASIC2.6□□□□□ -1.99
BRPF3Q9ULD4 MIR3683-201ENST00000580847 82 ntBASIC2.6□□□□□ -1.99
BRPF3Q9ULD4 MIR548AR-201ENST00000582191 57 ntBASIC2.6□□□□□ -1.99
BRPF3Q9ULD4 AC009831.4-201ENST00000620744 325 ntBASIC2.6□□□□□ -1.99
BRPF3Q9ULD4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
BRPF3Q9ULD4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.6□□□□□ -1.99
BRPF3Q9ULD4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
BRPF3Q9ULD4 Y_RNA.213-201ENST00000364178 111 ntBASIC2.59□□□□□ -1.99
BRPF3Q9ULD4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.59□□□□□ -1.99
BRPF3Q9ULD4 SNORD28B-201ENST00000390993 75 ntBASIC2.59□□□□□ -1.99
BRPF3Q9ULD4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.59□□□□□ -1.99
BRPF3Q9ULD4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
BRPF3Q9ULD4 MIR676-201ENST00000390702 67 ntBASIC2.58□□□□□ -2
BRPF3Q9ULD4 RN7SKP192-201ENST00000411291 327 ntBASIC2.58□□□□□ -2
BRPF3Q9ULD4 RPS29P29-201ENST00000456396 171 ntBASIC2.58□□□□□ -2
BRPF3Q9ULD4 RNU7-67P-201ENST00000459003 62 ntBASIC2.58□□□□□ -2
BRPF3Q9ULD4 RPL23AP42-201ENST00000471152 471 ntBASIC2.58□□□□□ -2
BRPF3Q9ULD4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.58□□□□□ -2
BRPF3Q9ULD4 RNU2-13P-201ENST00000515909 113 ntBASIC2.58□□□□□ -2
BRPF3Q9ULD4 RNU6-958P-201ENST00000516995 106 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms