Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNU6-1270P-201ENST00000517128 108 ntBASIC1.89□□□□□ -2.11
DKK3Q9UBP4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.89□□□□□ -2.11
DKK3Q9UBP4 U7.2-201ENST00000607576 63 ntBASIC1.89□□□□□ -2.11
DKK3Q9UBP4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
DKK3Q9UBP4 Y_RNA.410-201ENST00000383992 113 ntBASIC1.88□□□□□ -2.11
DKK3Q9UBP4 SNORD77.3-201ENST00000391113 65 ntBASIC1.88□□□□□ -2.11
DKK3Q9UBP4 MIR548O-201ENST00000408583 114 ntBASIC1.88□□□□□ -2.11
DKK3Q9UBP4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.88□□□□□ -2.11
DKK3Q9UBP4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.88□□□□□ -2.11
DKK3Q9UBP4 RNU6-479P-201ENST00000516348 105 ntBASIC1.88□□□□□ -2.11
DKK3Q9UBP4 RNU6-62P-201ENST00000516526 102 ntBASIC1.88□□□□□ -2.11
DKK3Q9UBP4 MIR4709-201ENST00000577272 72 ntBASIC1.88□□□□□ -2.11
DKK3Q9UBP4 MIR3129-201ENST00000581095 76 ntBASIC1.88□□□□□ -2.11
DKK3Q9UBP4 AC134878.1-201ENST00000619901 243 ntBASIC1.88□□□□□ -2.11
DKK3Q9UBP4 AL513423.1-201ENST00000621695 132 ntBASIC1.88□□□□□ -2.11
DKK3Q9UBP4 Y_RNA.291-201ENST00000364886 113 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 RNU6-22P-201ENST00000384355 107 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 RNU6-1081P-201ENST00000384537 107 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 AL603914.1-201ENST00000401964 204 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.87□□□□□ -2.11
DKK3Q9UBP4 RNU1-98P-201ENST00000458992 160 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 AC099513.1-201ENST00000490423 301 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 RNU6-970P-201ENST00000516312 107 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 RNU6-1116P-201ENST00000517269 99 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 MIR4285-201ENST00000581001 85 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 AC021506.2-201ENST00000612354 169 ntBASIC1.87□□□□□ -2.11
DKK3Q9UBP4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
DKK3Q9UBP4 Y_RNA.52-201ENST00000362760 96 ntBASIC1.86□□□□□ -2.11
DKK3Q9UBP4 RNU6-915P-201ENST00000364943 103 ntBASIC1.86□□□□□ -2.11
DKK3Q9UBP4 SNORD38C-201ENST00000384381 69 ntBASIC1.86□□□□□ -2.11
DKK3Q9UBP4 SNORA40.18-201ENST00000391200 128 ntBASIC1.86□□□□□ -2.11
DKK3Q9UBP4 BTF3P4-201ENST00000418852 495 ntBASIC1.86□□□□□ -2.11
DKK3Q9UBP4 AF228730.3-201ENST00000436691 102 ntBASIC1.86□□□□□ -2.11
DKK3Q9UBP4 RNU7-25P-201ENST00000516544 62 ntBASIC1.86□□□□□ -2.11
DKK3Q9UBP4 RNU6-971P-201ENST00000516920 106 ntBASIC1.86□□□□□ -2.11
DKK3Q9UBP4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.86□□□□□ -2.11
DKK3Q9UBP4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
DKK3Q9UBP4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.85□□□□□ -2.11
DKK3Q9UBP4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.85□□□□□ -2.11
DKK3Q9UBP4 U8.1-201ENST00000362843 134 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 SNORD115-28-201ENST00000363931 81 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 SNORD18B-201ENST00000365659 72 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 PGBD4P5-201ENST00000445958 426 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 AC087499.4-201ENST00000448505 178 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 RNU7-34P-201ENST00000459394 64 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 AC008834.1-201ENST00000511612 175 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 RNU7-12P-201ENST00000516030 62 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 Y_RNA.692-201ENST00000516627 105 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 SNORA31.17-201ENST00000516953 127 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 RNU2-60P-201ENST00000517290 128 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 Y_RNA.757-201ENST00000578934 114 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 MIR548AI-201ENST00000579940 88 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.85□□□□□ -2.11
DKK3Q9UBP4 MIR424-201ENST00000362227 98 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 Y_RNA.37-201ENST00000362606 108 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 RNU6-80P-201ENST00000384195 107 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 RNU6-997P-201ENST00000384725 107 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 MIR9-3-201ENST00000385084 90 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 MIR660-201ENST00000385235 97 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 AC015922.2-201ENST00000435593 184 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 MTATP6P21-201ENST00000440681 189 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 AC008267.6-201ENST00000441664 139 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.84□□□□□ -2.11
DKK3Q9UBP4 MIR3121-201ENST00000579680 77 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 MIR5197-201ENST00000583721 112 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 AC011603.4-201ENST00000611325 277 ntBASIC1.84□□□□□ -2.11
DKK3Q9UBP4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
DKK3Q9UBP4 Y_RNA.71-201ENST00000362892 104 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 Y_RNA.218-201ENST00000364218 104 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 Y_RNA.280-201ENST00000364765 112 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 RNU6-1189P-201ENST00000383958 107 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 MIR452-201ENST00000385020 85 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 RNU6-1168P-201ENST00000390831 104 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 SNORA17.3-201ENST00000391159 129 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 RNU2-51P-201ENST00000410708 197 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 RNU6-1211P-201ENST00000459179 105 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 RNA5SP236-201ENST00000516169 116 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 Y_RNA.686-201ENST00000516548 134 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 SCARNA15-202ENST00000516881 127 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
DKK3Q9UBP4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.83□□□□□ -2.12
DKK3Q9UBP4 Y_RNA.127-201ENST00000363386 109 ntBASIC1.82□□□□□ -2.12
DKK3Q9UBP4 SNORA16.1-201ENST00000364597 132 ntBASIC1.82□□□□□ -2.12
DKK3Q9UBP4 SNORD116-14-201ENST00000383894 92 ntBASIC1.82□□□□□ -2.12
DKK3Q9UBP4 SNORD116-17-201ENST00000383929 92 ntBASIC1.82□□□□□ -2.12
DKK3Q9UBP4 SNORD116-15-201ENST00000384445 92 ntBASIC1.82□□□□□ -2.12
DKK3Q9UBP4 SNORD116-19-201ENST00000384729 92 ntBASIC1.82□□□□□ -2.12
DKK3Q9UBP4 RNU6-938P-201ENST00000411285 103 ntBASIC1.82□□□□□ -2.12
DKK3Q9UBP4 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
DKK3Q9UBP4 RNU4-57P-201ENST00000515980 135 ntBASIC1.82□□□□□ -2.12
DKK3Q9UBP4 RNA5SP480-201ENST00000516840 109 ntBASIC1.82□□□□□ -2.12
DKK3Q9UBP4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.82□□□□□ -2.12
DKK3Q9UBP4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
DKK3Q9UBP4 MTND5P32-201ENST00000560711 1802 ntBASIC1.82□□□□□ -2.12
DKK3Q9UBP4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
DKK3Q9UBP4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms