Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC087499.4-201ENST00000448505 178 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 SNORD4A-201ENST00000459174 72 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 RPL39P34-201ENST00000477141 156 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 RPS29P24-201ENST00000486345 171 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 RNU6-504P-201ENST00000516568 104 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 SNORA31.14-201ENST00000516728 116 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 RNU7-149P-201ENST00000516739 59 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 MIR4743-201ENST00000584576 69 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 AC022140.2-201ENST00000623500 188 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.38□□□□□ -2.47
VAPAQ9P0L0 RNA5SP163-201ENST00000410304 99 ntBASIC-0.38□□□□□ -2.47
VAPAQ9P0L0 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.38□□□□□ -2.47
VAPAQ9P0L0 RNU7-159P-201ENST00000459284 62 ntBASIC-0.38□□□□□ -2.47
VAPAQ9P0L0 RNA5SP47-201ENST00000517230 109 ntBASIC-0.38□□□□□ -2.47
VAPAQ9P0L0 AC007751.1-201ENST00000529260 376 ntBASIC-0.38□□□□□ -2.47
VAPAQ9P0L0 MIR4423-201ENST00000580922 80 ntBASIC-0.38□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 RNU6-403P-201ENST00000363163 104 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 POLR2KP2-201ENST00000438155 177 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 RNU7-165P-201ENST00000458864 60 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 RNU6-320P-201ENST00000516511 106 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 RNU7-110P-201ENST00000516891 62 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 AC024909.2-201ENST00000553035 286 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 AC011921.3-201ENST00000605540 361 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 MIR1295B-201ENST00000636144 60 ntBASIC-0.39□□□□□ -2.47
VAPAQ9P0L0 RNA5SP457-201ENST00000363657 124 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 SNORA72.4-201ENST00000384174 132 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 RNU6-938P-201ENST00000411285 103 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 AC096644.2-201ENST00000429278 159 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 AL138752.1-201ENST00000452964 351 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 RNU6-135P-201ENST00000516769 101 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 RNU6-782P-201ENST00000516852 104 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 AC026407.1-201ENST00000518369 204 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 RNU1-29P-201ENST00000606574 126 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 AC011373.1-201ENST00000607270 237 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 AC122108.2-201ENST00000611946 526 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 MIR3688-2-201ENST00000636963 87 ntBASIC-0.4□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.41□□□□□ -2.48
VAPAQ9P0L0 RNU4-30P-201ENST00000410245 143 ntBASIC-0.41□□□□□ -2.48
VAPAQ9P0L0 PDCL2P1-201ENST00000419302 352 ntBASIC-0.41□□□□□ -2.48
VAPAQ9P0L0 TRBVB-201ENST00000477100 408 ntBASIC-0.41□□□□□ -2.48
VAPAQ9P0L0 AC131281.1-201ENST00000522984 164 ntBASIC-0.41□□□□□ -2.48
VAPAQ9P0L0 AC138869.1-201ENST00000568623 124 ntBASIC-0.41□□□□□ -2.48
VAPAQ9P0L0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.41□□□□□ -2.48
VAPAQ9P0L0 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 RNU6-801P-201ENST00000364087 105 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 RNU6-310P-201ENST00000384655 107 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 SNORD28-201ENST00000384706 75 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 MIR548I3-201ENST00000408378 149 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 RNU4-14P-201ENST00000410858 122 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 AC104692.1-201ENST00000472406 90 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 RNU6-911P-201ENST00000516523 104 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 AC006600.1-201ENST00000572529 153 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 MIR6082-201ENST00000613604 109 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 AP001282.2-201ENST00000616149 309 ntBASIC-0.42□□□□□ -2.48
VAPAQ9P0L0 RNU6-890P-201ENST00000384121 107 ntBASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 MIR215-201ENST00000384858 110 ntBASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 MIR329-2-201ENST00000385029 84 ntBASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 SNORD77.3-201ENST00000391113 65 ntBASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 RNA5SP237-201ENST00000410414 113 ntBASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 RNU2-11P-201ENST00000459191 187 ntBASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 SNORD36C-201ENST00000516733 66 ntBASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 AL049861.1-201ENST00000603130 150 ntBASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.43□□□□□ -2.48
VAPAQ9P0L0 RNA5SP257-201ENST00000363023 116 ntBASIC-0.44□□□□□ -2.48
VAPAQ9P0L0 RNU6-161P-201ENST00000363051 106 ntBASIC-0.44□□□□□ -2.48
VAPAQ9P0L0 RNU6-370P-201ENST00000411008 104 ntBASIC-0.44□□□□□ -2.48
VAPAQ9P0L0 MTND4P17-201ENST00000470444 350 ntBASIC-0.44□□□□□ -2.48
VAPAQ9P0L0 RNU6-693P-201ENST00000516134 107 ntBASIC-0.44□□□□□ -2.48
VAPAQ9P0L0 MIR4639-201ENST00000584938 69 ntBASIC-0.44□□□□□ -2.48
VAPAQ9P0L0 AC244669.1-204ENST00000621564 178 ntBASIC-0.44□□□□□ -2.48
VAPAQ9P0L0 AC138305.3-201ENST00000624988 240 ntBASIC-0.44□□□□□ -2.48
VAPAQ9P0L0 RNU4-80P-201ENST00000363200 141 ntBASIC-0.45□□□□□ -2.48
VAPAQ9P0L0 SNORA18.1-201ENST00000363418 128 ntBASIC-0.45□□□□□ -2.48
VAPAQ9P0L0 RNU6-652P-201ENST00000365488 107 ntBASIC-0.45□□□□□ -2.48
VAPAQ9P0L0 MIR501-201ENST00000390204 84 ntBASIC-0.45□□□□□ -2.48
VAPAQ9P0L0 RNU6-308P-201ENST00000390957 107 ntBASIC-0.45□□□□□ -2.48
VAPAQ9P0L0 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.45□□□□□ -2.48
VAPAQ9P0L0 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.45□□□□□ -2.48
VAPAQ9P0L0 RNU7-30P-201ENST00000516835 62 ntBASIC-0.45□□□□□ -2.48
VAPAQ9P0L0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.45□□□□□ -2.48
VAPAQ9P0L0 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.45□□□□□ -2.48
VAPAQ9P0L0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.45□□□□□ -2.48
VAPAQ9P0L0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 SNORD116-2-201ENST00000384274 95 ntBASIC-0.46□□□□□ -2.48
VAPAQ9P0L0 SNORA72.6-201ENST00000384520 129 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms