Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MIR6734-201ENST00000621166 68 ntBASIC1.12□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.257-201ENST00000364596 102 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.412-201ENST00000384001 104 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 RNU6-42P-201ENST00000384165 107 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 SNORD61-201ENST00000384252 73 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 RNU4-70P-201ENST00000384579 139 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 MIR15B-201ENST00000385045 98 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 RNU6-578P-201ENST00000390980 103 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 RNU6-693P-201ENST00000516134 107 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 RN7SKP88-201ENST00000516847 250 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 AL096861.1-201ENST00000610899 123 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 7SK.8-201ENST00000612110 250 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 MIR6504-201ENST00000613520 61 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 7SK.11-201ENST00000615477 250 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 7SK.13-201ENST00000622040 250 ntBASIC1.11□□□□□ -2.23
NDE1Q9NXR1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.1□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.66-201ENST00000362862 102 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 RNU6-1020P-201ENST00000363684 107 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 RNU6-103P-201ENST00000363686 107 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 SNORA7.1-201ENST00000363750 139 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.634-201ENST00000364811 113 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 MIR548A2-201ENST00000384956 97 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.1□□□□□ -2.23
NDE1Q9NXR1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.1□□□□□ -2.23
NDE1Q9NXR1 RNU7-41P-201ENST00000515917 61 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 RNU4-57P-201ENST00000515980 135 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 RNU6-1219P-201ENST00000516143 112 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 SNORA74.3-201ENST00000517108 154 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 MIR4662B-201ENST00000579498 81 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 MIR548AR-201ENST00000582191 57 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
NDE1Q9NXR1 MIR3192-201ENST00000584920 77 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 U6.106-201ENST00000636360 105 ntBASIC1.1□□□□□ -2.23
NDE1Q9NXR1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
NDE1Q9NXR1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
NDE1Q9NXR1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.23-201ENST00000362496 106 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 RNU6-200P-201ENST00000364743 107 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 RNU6-728P-201ENST00000365375 104 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 RNY3P5-201ENST00000384127 102 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 MIR518F-201ENST00000384973 87 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 U8.17-201ENST00000391292 132 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 MTND5P15-201ENST00000434246 349 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 snoU13.25-201ENST00000458945 104 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.644-201ENST00000459006 113 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 RPL30P7-201ENST00000479312 323 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.09□□□□□ -2.23
NDE1Q9NXR1 RNA5SP220-201ENST00000516298 104 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.674-201ENST00000516362 113 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 RNU6-365P-201ENST00000517113 106 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 Z83818.1-201ENST00000603584 150 ntBASIC1.09□□□□□ -2.23
NDE1Q9NXR1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
NDE1Q9NXR1 AL442644.1-201ENST00000454390 3105 ntBASIC1.09□□□□□ -2.24
NDE1Q9NXR1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.08□□□□□ -2.24
NDE1Q9NXR1 SNORA25.8-201ENST00000364831 128 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 RNU6-1318P-201ENST00000365389 103 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 MIR520C-201ENST00000385005 87 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 MIR1276-201ENST00000408707 83 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.793-201ENST00000411222 111 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
NDE1Q9NXR1 RNU6-197P-201ENST00000516680 100 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 MIR4764-201ENST00000580680 88 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 SNORA4-201ENST00000584302 138 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 AC091895.1-201ENST00000624494 256 ntBASIC1.08□□□□□ -2.24
NDE1Q9NXR1 SNORA25.3-201ENST00000363205 127 ntBASIC1.07□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.121-201ENST00000363309 113 ntBASIC1.07□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.242-201ENST00000364473 110 ntBASIC1.07□□□□□ -2.24
NDE1Q9NXR1 SNORA1-201ENST00000384107 130 ntBASIC1.07□□□□□ -2.24
NDE1Q9NXR1 RNU2-55P-201ENST00000411146 174 ntBASIC1.07□□□□□ -2.24
NDE1Q9NXR1 AC048334.1-201ENST00000477975 159 ntBASIC1.07□□□□□ -2.24
NDE1Q9NXR1 RNU6-830P-201ENST00000516353 107 ntBASIC1.07□□□□□ -2.24
NDE1Q9NXR1 SNORD36C-201ENST00000516733 66 ntBASIC1.07□□□□□ -2.24
NDE1Q9NXR1 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
NDE1Q9NXR1 RNU6-888P-201ENST00000363010 101 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 SNORD115-28-201ENST00000363931 81 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.233-201ENST00000364407 101 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 RNU6-275P-201ENST00000364910 107 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 SNORD24-201ENST00000383884 75 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.494-201ENST00000384432 111 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 SNORA79-201ENST00000408376 140 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 SNORA31.2-201ENST00000516019 134 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 RNA5SP153-201ENST00000516498 76 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 RNU6-504P-201ENST00000516568 104 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 AP002392.1-201ENST00000537692 208 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 AL357312.1-201ENST00000603879 298 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
NDE1Q9NXR1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.06□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.37-201ENST00000362606 108 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 Y_RNA.241-201ENST00000364470 117 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 RNU6-938P-201ENST00000411285 103 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 AC006461.1-201ENST00000412637 326 ntBASIC1.05□□□□□ -2.24
NDE1Q9NXR1 AF228730.3-201ENST00000436691 102 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms