Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 SNORD115-43-201ENST00000365503 82 ntBASIC2.62□□□□□ -1.99
TMEM39AQ9NV64 SNORD115-36-201ENST00000365629 82 ntBASIC2.62□□□□□ -1.99
TMEM39AQ9NV64 MIR516B2-201ENST00000385190 85 ntBASIC2.62□□□□□ -1.99
TMEM39AQ9NV64 RNA5SP247-201ENST00000411181 105 ntBASIC2.62□□□□□ -1.99
TMEM39AQ9NV64 RNA5SP270-201ENST00000411361 118 ntBASIC2.62□□□□□ -1.99
TMEM39AQ9NV64 IGLV3-17-201ENST00000519099 244 ntBASIC2.62□□□□□ -1.99
TMEM39AQ9NV64 AC090821.2-201ENST00000523552 176 ntBASIC2.62□□□□□ -1.99
TMEM39AQ9NV64 SNORD115-40-201ENST00000606510 82 ntBASIC2.62□□□□□ -1.99
TMEM39AQ9NV64 AC009831.4-201ENST00000620744 325 ntBASIC2.62□□□□□ -1.99
TMEM39AQ9NV64 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TMEM39AQ9NV64 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 MIR302B-201ENST00000362188 73 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 RNU6-296P-201ENST00000384608 107 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 MIR452-201ENST00000385020 85 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 MT-TI-201ENST00000387365 69 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 AL035398.1-201ENST00000430869 322 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 AC093850.1-201ENST00000454121 251 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 HMGN2P23-201ENST00000456759 269 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 RNU7-96P-201ENST00000459535 64 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 RPL23AP42-201ENST00000471152 471 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 RPS29P24-201ENST00000486345 171 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 RNU6-998P-201ENST00000515894 101 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 MIR4709-201ENST00000577272 72 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 MIR3683-201ENST00000580847 82 ntBASIC2.61□□□□□ -1.99
TMEM39AQ9NV64 Y_RNA.49-201ENST00000362714 112 ntBASIC2.6□□□□□ -1.99
TMEM39AQ9NV64 RNU6-1255P-201ENST00000363434 112 ntBASIC2.6□□□□□ -1.99
TMEM39AQ9NV64 Y_RNA.362-201ENST00000365518 110 ntBASIC2.6□□□□□ -1.99
TMEM39AQ9NV64 RNU6-1104P-201ENST00000384723 104 ntBASIC2.6□□□□□ -1.99
TMEM39AQ9NV64 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.6□□□□□ -1.99
TMEM39AQ9NV64 MIR5092-201ENST00000583139 88 ntBASIC2.6□□□□□ -1.99
TMEM39AQ9NV64 SNORD14A-201ENST00000606526 91 ntBASIC2.6□□□□□ -1.99
TMEM39AQ9NV64 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TMEM39AQ9NV64 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
TMEM39AQ9NV64 AC131280.1-202ENST00000624067 4211 ntBASIC2.6□□□□□ -1.99
TMEM39AQ9NV64 AC016717.2-201ENST00000609089 5141 ntBASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 Y_RNA.163-201ENST00000363702 113 ntBASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 RNU6-1014P-201ENST00000383940 103 ntBASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 MIR1302-5-201ENST00000408164 150 ntBASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 AC107297.1-201ENST00000459991 176 ntBASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 RNU2-35P-201ENST00000516446 142 ntBASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 RNA5SP481-201ENST00000516814 122 ntBASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 AC022523.2-201ENST00000561045 150 ntBASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 AC021506.2-201ENST00000612354 169 ntBASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TMEM39AQ9NV64 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TMEM39AQ9NV64 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TMEM39AQ9NV64 RNU1-51P-201ENST00000365345 176 ntBASIC2.58□□□□□ -2
TMEM39AQ9NV64 MIR136-201ENST00000385207 82 ntBASIC2.58□□□□□ -2
TMEM39AQ9NV64 snoU13.27-201ENST00000459278 104 ntBASIC2.58□□□□□ -2
TMEM39AQ9NV64 RPL39P34-201ENST00000477141 156 ntBASIC2.58□□□□□ -2
TMEM39AQ9NV64 U1.36-201ENST00000620684 176 ntBASIC2.58□□□□□ -2
TMEM39AQ9NV64 AC106754.2-201ENST00000623006 233 ntBASIC2.58□□□□□ -2
TMEM39AQ9NV64 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
TMEM39AQ9NV64 RNA5SP393-201ENST00000363423 117 ntBASIC2.57□□□□□ -2
TMEM39AQ9NV64 SNORA1.2-201ENST00000365189 134 ntBASIC2.57□□□□□ -2
TMEM39AQ9NV64 RNU2-11P-201ENST00000459191 187 ntBASIC2.57□□□□□ -2
TMEM39AQ9NV64 SNORA31.4-201ENST00000516049 129 ntBASIC2.57□□□□□ -2
TMEM39AQ9NV64 Y_RNA.677-201ENST00000516401 85 ntBASIC2.57□□□□□ -2
TMEM39AQ9NV64 RNU6-537P-201ENST00000517277 103 ntBASIC2.57□□□□□ -2
TMEM39AQ9NV64 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
TMEM39AQ9NV64 Y_RNA.323-201ENST00000365157 109 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 Y_RNA.338-201ENST00000365320 114 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 Y_RNA.370-201ENST00000365589 108 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 RNU6-756P-201ENST00000383997 107 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 SNORA51.5-201ENST00000384126 131 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 SNORA64-201ENST00000384674 134 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 Y_RNA.694-201ENST00000516677 117 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 MIR3163-201ENST00000581592 73 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 RNU6-94P-201ENST00000607728 107 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 AL513423.1-201ENST00000621695 132 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 AC021613.1-201ENST00000623880 111 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
TMEM39AQ9NV64 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.56□□□□□ -2
TMEM39AQ9NV64 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
TMEM39AQ9NV64 RNU6-766P-201ENST00000362478 107 ntBASIC2.55□□□□□ -2
TMEM39AQ9NV64 MIR548D2-201ENST00000384955 97 ntBASIC2.55□□□□□ -2
TMEM39AQ9NV64 MIR660-201ENST00000385235 97 ntBASIC2.55□□□□□ -2
TMEM39AQ9NV64 RNA5SP144-201ENST00000410846 116 ntBASIC2.55□□□□□ -2
TMEM39AQ9NV64 PGBD4P5-201ENST00000445958 426 ntBASIC2.55□□□□□ -2
TMEM39AQ9NV64 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.55□□□□□ -2
TMEM39AQ9NV64 SNORD3E-202ENST00000627253 216 ntBASIC2.55□□□□□ -2
TMEM39AQ9NV64 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.54□□□□□ -2
TMEM39AQ9NV64 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
TMEM39AQ9NV64 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TMEM39AQ9NV64 Y_RNA.164-201ENST00000363709 102 ntBASIC2.54□□□□□ -2
TMEM39AQ9NV64 U8.6-201ENST00000364939 135 ntBASIC2.54□□□□□ -2
TMEM39AQ9NV64 Y_RNA.328-201ENST00000365208 113 ntBASIC2.54□□□□□ -2
TMEM39AQ9NV64 Y_RNA.344-201ENST00000365381 112 ntBASIC2.54□□□□□ -2
TMEM39AQ9NV64 AC099513.1-201ENST00000490423 301 ntBASIC2.54□□□□□ -2
TMEM39AQ9NV64 AC068339.1-201ENST00000526965 141 ntBASIC2.54□□□□□ -2
TMEM39AQ9NV64 AC092881.1-201ENST00000638218 2733 ntBASIC2.54□□□□□ -2
TMEM39AQ9NV64 Y_RNA.140-201ENST00000363474 103 ntBASIC2.53□□□□□ -2
TMEM39AQ9NV64 SNORA3A-201ENST00000364113 130 ntBASIC2.53□□□□□ -2
TMEM39AQ9NV64 SNORA67.1-201ENST00000364749 141 ntBASIC2.53□□□□□ -2
TMEM39AQ9NV64 SNORA67.3-201ENST00000384366 140 ntBASIC2.53□□□□□ -2
TMEM39AQ9NV64 MIR524-201ENST00000385242 87 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms