Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AL161722.3-201ENST00000605789 2983 ntBASIC1.25□□□□□ -2.21
HINT3Q9NQE9 ZNF209P-201ENST00000593450 2304 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HINT3Q9NQE9 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 MIR570-201ENST00000384917 97 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 RNU6-938P-201ENST00000411285 103 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 AC245047.7-201ENST00000440265 293 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 AC009474.2-201ENST00000451383 136 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 AC048334.1-201ENST00000477975 159 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 SNORA31.2-201ENST00000516019 134 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 RNU6-1219P-201ENST00000516143 112 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 Y_RNA.700-201ENST00000516806 100 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 AC068338.1-201ENST00000565567 176 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 AC072026.1-201ENST00000605023 201 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 AC134878.1-201ENST00000619901 243 ntBASIC1.24□□□□□ -2.21
HINT3Q9NQE9 Y_RNA.241-201ENST00000364470 117 ntBASIC1.23□□□□□ -2.21
HINT3Q9NQE9 RNU6-643P-201ENST00000384018 107 ntBASIC1.23□□□□□ -2.21
HINT3Q9NQE9 RNU6-1067P-201ENST00000384752 107 ntBASIC1.23□□□□□ -2.21
HINT3Q9NQE9 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
HINT3Q9NQE9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HINT3Q9NQE9 AP1B1P2-201ENST00000416196 106 ntBASIC1.23□□□□□ -2.21
HINT3Q9NQE9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.23□□□□□ -2.21
HINT3Q9NQE9 AF228730.3-201ENST00000436691 102 ntBASIC1.23□□□□□ -2.21
HINT3Q9NQE9 RPS29P23-201ENST00000458635 123 ntBASIC1.23□□□□□ -2.21
HINT3Q9NQE9 AL133373.1-201ENST00000497098 94 ntBASIC1.23□□□□□ -2.21
HINT3Q9NQE9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.23□□□□□ -2.21
HINT3Q9NQE9 AP002392.1-201ENST00000537692 208 ntBASIC1.23□□□□□ -2.21
HINT3Q9NQE9 MIR378D2-201ENST00000580636 98 ntBASIC1.23□□□□□ -2.21
HINT3Q9NQE9 AC090425.1-201ENST00000610007 140 ntBASIC1.23□□□□□ -2.21
HINT3Q9NQE9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.23□□□□□ -2.21
HINT3Q9NQE9 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
HINT3Q9NQE9 Y_RNA.29-201ENST00000362570 113 ntBASIC1.22□□□□□ -2.21
HINT3Q9NQE9 RNA5SP48-201ENST00000363969 126 ntBASIC1.22□□□□□ -2.21
HINT3Q9NQE9 RNU6-1318P-201ENST00000365389 103 ntBASIC1.22□□□□□ -2.21
HINT3Q9NQE9 SNORA1-201ENST00000384107 130 ntBASIC1.22□□□□□ -2.21
HINT3Q9NQE9 RNU6-955P-201ENST00000410497 104 ntBASIC1.22□□□□□ -2.21
HINT3Q9NQE9 RNU7-95P-201ENST00000459222 64 ntBASIC1.22□□□□□ -2.21
HINT3Q9NQE9 RPS26P48-201ENST00000491713 339 ntBASIC1.22□□□□□ -2.21
HINT3Q9NQE9 RNU2-13P-201ENST00000515909 113 ntBASIC1.22□□□□□ -2.21
HINT3Q9NQE9 SNORA81.3-201ENST00000517283 198 ntBASIC1.22□□□□□ -2.21
HINT3Q9NQE9 AP003484.1-201ENST00000530974 250 ntBASIC1.22□□□□□ -2.21
HINT3Q9NQE9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-34-201ENST00000362441 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-12-201ENST00000362583 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-29-201ENST00000362834 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-9-201ENST00000362912 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-21-201ENST00000362963 81 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-14-201ENST00000363090 81 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-13-201ENST00000363358 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-41-201ENST00000363608 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-11-201ENST00000363616 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-5-201ENST00000363633 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-39-201ENST00000363694 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-4-201ENST00000363810 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-16-201ENST00000363887 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-6-201ENST00000363942 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-42-201ENST00000364273 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 RNU6-978P-201ENST00000364371 103 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 RNU6-312P-201ENST00000364629 107 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-15-201ENST00000364809 81 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-1-201ENST00000364961 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-26-201ENST00000365067 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-10-201ENST00000365073 81 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-43-201ENST00000365503 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-36-201ENST00000365629 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 Y_RNA.785-201ENST00000384290 109 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 Y_RNA.494-201ENST00000384432 111 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 Y_RNA.537-201ENST00000384626 109 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORA40.5-201ENST00000391061 128 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
HINT3Q9NQE9 RPS29P29-201ENST00000456396 171 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 AC107297.1-201ENST00000459991 176 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORA31.4-201ENST00000516049 129 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD116-25-201ENST00000516517 92 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD36C-201ENST00000516733 66 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 MIR4431-201ENST00000579990 94 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 SNORD115-40-201ENST00000606510 82 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 MIR4791-201ENST00000607666 84 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 MIR4251-201ENST00000635819 61 ntBASIC1.21□□□□□ -2.22
HINT3Q9NQE9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.21□□□□□ -2.22
HINT3Q9NQE9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.2□□□□□ -2.22
HINT3Q9NQE9 SNORA25.3-201ENST00000363205 127 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 Y_RNA.338-201ENST00000365320 114 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 Y_RNA.410-201ENST00000383992 113 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 SNORA51.10-201ENST00000384418 136 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 Y_RNA.542-201ENST00000384641 111 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 SNORD77.3-201ENST00000391113 65 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 AC006461.1-201ENST00000412637 326 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.2□□□□□ -2.22
HINT3Q9NQE9 MTND5P15-201ENST00000434246 349 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 RNU7-120P-201ENST00000459334 63 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 AC108729.3-201ENST00000513484 108 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 SNORA18.4-201ENST00000516440 124 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 AC090821.2-201ENST00000523552 176 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 AP003716.2-201ENST00000528260 108 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 MIR3671-201ENST00000580455 88 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 MIR3129-201ENST00000581095 76 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 snoU13.31-201ENST00000607291 104 ntBASIC1.2□□□□□ -2.22
HINT3Q9NQE9 AC243994.1-201ENST00000618627 109 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms