Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 RPS29P29-201ENST00000456396 171 ntBASIC1.86□□□□□ -2.11
PIF1Q9H611 RNU2-13P-201ENST00000515909 113 ntBASIC1.86□□□□□ -2.11
PIF1Q9H611 RNU7-200P-201ENST00000516105 62 ntBASIC1.86□□□□□ -2.11
PIF1Q9H611 RNU6-346P-201ENST00000516288 111 ntBASIC1.86□□□□□ -2.11
PIF1Q9H611 MIR4648-201ENST00000580107 72 ntBASIC1.86□□□□□ -2.11
PIF1Q9H611 MIR3129-201ENST00000581095 76 ntBASIC1.86□□□□□ -2.11
PIF1Q9H611 MIR5197-201ENST00000583721 112 ntBASIC1.86□□□□□ -2.11
PIF1Q9H611 MIR3658-201ENST00000636291 56 ntBASIC1.86□□□□□ -2.11
PIF1Q9H611 AP000648.3-201ENST00000623539 4507 ntBASIC1.86□□□□□ -2.11
PIF1Q9H611 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PIF1Q9H611 SNORA24-201ENST00000384096 131 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 SNORA70B-201ENST00000384210 135 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 RNU6-125P-201ENST00000384505 107 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 SNORA64-201ENST00000384674 134 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PIF1Q9H611 SNORD77.3-201ENST00000391113 65 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 AC019129.1-201ENST00000403786 261 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 RPS29P24-201ENST00000486345 171 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 CYP3A52P-201ENST00000563326 91 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 MIR4791-201ENST00000607666 84 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 AC243994.1-201ENST00000618627 109 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 MIR4251-201ENST00000635819 61 ntBASIC1.85□□□□□ -2.11
PIF1Q9H611 RNU6-818P-201ENST00000364837 108 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 SNORA1-201ENST00000384107 130 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 RNU6-768P-201ENST00000384683 107 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 SNORD37.2-201ENST00000391075 66 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 snoU13.16-201ENST00000459350 104 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 UBL5P3-201ENST00000475112 231 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 RPS26P48-201ENST00000491713 339 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 RPL23AP94-201ENST00000512518 302 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 Y_RNA.703-201ENST00000516846 111 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 RNU11-2P-201ENST00000516898 142 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 Y_RNA.778-201ENST00000620203 90 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 MIR6844-201ENST00000637122 62 ntBASIC1.84□□□□□ -2.11
PIF1Q9H611 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.12
PIF1Q9H611 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.12
PIF1Q9H611 SNORD28B-201ENST00000390993 75 ntBASIC1.83□□□□□ -2.12
PIF1Q9H611 RNU7-67P-201ENST00000459003 62 ntBASIC1.83□□□□□ -2.12
PIF1Q9H611 RNU7-70P-201ENST00000516941 66 ntBASIC1.83□□□□□ -2.12
PIF1Q9H611 RNU6-165P-201ENST00000517170 99 ntBASIC1.83□□□□□ -2.12
PIF1Q9H611 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.83□□□□□ -2.12
PIF1Q9H611 AL096861.1-201ENST00000610899 123 ntBASIC1.83□□□□□ -2.12
PIF1Q9H611 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
PIF1Q9H611 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PIF1Q9H611 U8.2-201ENST00000363156 134 ntBASIC1.82□□□□□ -2.12
PIF1Q9H611 RNU4-11P-201ENST00000365287 132 ntBASIC1.82□□□□□ -2.12
PIF1Q9H611 RNY1P5-201ENST00000383890 115 ntBASIC1.82□□□□□ -2.12
PIF1Q9H611 Y_RNA.400-201ENST00000383963 111 ntBASIC1.82□□□□□ -2.12
PIF1Q9H611 Y_RNA.440-201ENST00000384120 114 ntBASIC1.82□□□□□ -2.12
PIF1Q9H611 RNU6-187P-201ENST00000384139 106 ntBASIC1.82□□□□□ -2.12
PIF1Q9H611 RNU6-938P-201ENST00000411285 103 ntBASIC1.82□□□□□ -2.12
PIF1Q9H611 CYCSP49-201ENST00000420810 319 ntBASIC1.82□□□□□ -2.12
PIF1Q9H611 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PIF1Q9H611 SNORD36C-201ENST00000516733 66 ntBASIC1.82□□□□□ -2.12
PIF1Q9H611 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PIF1Q9H611 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
PIF1Q9H611 RNA5SP126-201ENST00000365092 109 ntBASIC1.81□□□□□ -2.12
PIF1Q9H611 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.81□□□□□ -2.12
PIF1Q9H611 RNA5SP261-201ENST00000410536 106 ntBASIC1.81□□□□□ -2.12
PIF1Q9H611 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.81□□□□□ -2.12
PIF1Q9H611 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.81□□□□□ -2.12
PIF1Q9H611 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.81□□□□□ -2.12
PIF1Q9H611 AL035398.1-201ENST00000430869 322 ntBASIC1.81□□□□□ -2.12
PIF1Q9H611 AC245047.7-201ENST00000440265 293 ntBASIC1.81□□□□□ -2.12
PIF1Q9H611 RNU7-73P-201ENST00000458743 63 ntBASIC1.81□□□□□ -2.12
PIF1Q9H611 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
PIF1Q9H611 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.81□□□□□ -2.12
PIF1Q9H611 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.81□□□□□ -2.12
PIF1Q9H611 Y_RNA.215-201ENST00000364204 112 ntBASIC1.8□□□□□ -2.12
PIF1Q9H611 RNU6-1336P-201ENST00000383886 109 ntBASIC1.8□□□□□ -2.12
PIF1Q9H611 RNU6-588P-201ENST00000410281 105 ntBASIC1.8□□□□□ -2.12
PIF1Q9H611 RNU6-998P-201ENST00000515894 101 ntBASIC1.8□□□□□ -2.12
PIF1Q9H611 RNU7-41P-201ENST00000515917 61 ntBASIC1.8□□□□□ -2.12
PIF1Q9H611 RNU1-41P-201ENST00000516161 162 ntBASIC1.8□□□□□ -2.12
PIF1Q9H611 RNU1-48P-201ENST00000516400 162 ntBASIC1.8□□□□□ -2.12
PIF1Q9H611 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.8□□□□□ -2.12
PIF1Q9H611 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.8□□□□□ -2.12
PIF1Q9H611 Y_RNA.488-201ENST00000384403 102 ntBASIC1.79□□□□□ -2.12
PIF1Q9H611 MTATP6P21-201ENST00000440681 189 ntBASIC1.79□□□□□ -2.12
PIF1Q9H611 RPS29P23-201ENST00000458635 123 ntBASIC1.79□□□□□ -2.12
PIF1Q9H611 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.79□□□□□ -2.12
PIF1Q9H611 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.79□□□□□ -2.12
PIF1Q9H611 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PIF1Q9H611 MIR302B-201ENST00000362188 73 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 RNU6-1082P-201ENST00000364574 107 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 SNORD12-201ENST00000391002 90 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 MIR513C-201ENST00000401352 84 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 SNORA25.12-201ENST00000516202 82 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 AC112693.2-201ENST00000556538 232 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 MIR548X2-201ENST00000579776 100 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 MIR3945-201ENST00000581853 98 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 AC131055.1-201ENST00000584626 316 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 MIR3192-201ENST00000584920 77 ntBASIC1.78□□□□□ -2.12
PIF1Q9H611 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
PIF1Q9H611 RNA5SP264-201ENST00000363115 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms