Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SNORD115-26-201ENST00000365067 82 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 SNORD115-10-201ENST00000365073 81 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 SNORA4.2-201ENST00000365313 147 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 RNU1-51P-201ENST00000365345 176 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 SNORD115-43-201ENST00000365503 82 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 SNORD115-36-201ENST00000365629 82 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 RNU6-1031P-201ENST00000384773 107 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 SNORA48.1-201ENST00000390879 135 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 MIR1302-5-201ENST00000408164 150 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 RPL39P34-201ENST00000477141 156 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 RNU6-998P-201ENST00000515894 101 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 RNVU1-2-201ENST00000516326 135 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 RNA5SP168-201ENST00000516642 112 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 SNORD115-40-201ENST00000606510 82 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 MIR4679-1-201ENST00000637619 75 ntBASIC2.42□□□□□ -2.02
FOXP3Q9BZS1 RNU6-414P-201ENST00000363705 104 ntBASIC2.41□□□□□ -2.02
FOXP3Q9BZS1 Y_RNA.241-201ENST00000364470 117 ntBASIC2.41□□□□□ -2.02
FOXP3Q9BZS1 RNU6-756P-201ENST00000383997 107 ntBASIC2.41□□□□□ -2.02
FOXP3Q9BZS1 HMGN2P39-201ENST00000398005 273 ntBASIC2.41□□□□□ -2.02
FOXP3Q9BZS1 RNU7-96P-201ENST00000459535 64 ntBASIC2.41□□□□□ -2.02
FOXP3Q9BZS1 RNU6-537P-201ENST00000517277 103 ntBASIC2.41□□□□□ -2.02
FOXP3Q9BZS1 IGKV3-31-201ENST00000523109 329 ntBASIC2.41□□□□□ -2.02
FOXP3Q9BZS1 SUB1P4-201ENST00000566062 339 ntBASIC2.41□□□□□ -2.02
FOXP3Q9BZS1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
FOXP3Q9BZS1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.41□□□□□ -2.02
FOXP3Q9BZS1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
FOXP3Q9BZS1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
FOXP3Q9BZS1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.02
FOXP3Q9BZS1 Y_RNA.494-201ENST00000384432 111 ntBASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 RNU6-1104P-201ENST00000384723 104 ntBASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 MIR520A-201ENST00000384862 85 ntBASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 AL035398.1-201ENST00000430869 322 ntBASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 snoU13.26-201ENST00000459452 105 ntBASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 SNORA31.4-201ENST00000516049 129 ntBASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 RNU2-35P-201ENST00000516446 142 ntBASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 AC090821.2-201ENST00000523552 176 ntBASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 MIR5582-201ENST00000579697 68 ntBASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 HSPE1P19-201ENST00000603327 295 ntBASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
FOXP3Q9BZS1 SNORA51.5-201ENST00000384126 131 ntBASIC2.39□□□□□ -2.03
FOXP3Q9BZS1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.39□□□□□ -2.03
FOXP3Q9BZS1 SNX2P2-201ENST00000424553 323 ntBASIC2.39□□□□□ -2.03
FOXP3Q9BZS1 AC104435.1-201ENST00000483483 166 ntBASIC2.39□□□□□ -2.03
FOXP3Q9BZS1 AC026436.1-201ENST00000510537 270 ntBASIC2.39□□□□□ -2.03
FOXP3Q9BZS1 RNU7-12P-201ENST00000516030 62 ntBASIC2.39□□□□□ -2.03
FOXP3Q9BZS1 RNA5SP281-201ENST00000516504 135 ntBASIC2.39□□□□□ -2.03
FOXP3Q9BZS1 AC022523.2-201ENST00000561045 150 ntBASIC2.39□□□□□ -2.03
FOXP3Q9BZS1 AC006254.2-201ENST00000603259 279 ntBASIC2.39□□□□□ -2.03
FOXP3Q9BZS1 MIR7843-201ENST00000622274 79 ntBASIC2.39□□□□□ -2.03
FOXP3Q9BZS1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.39□□□□□ -2.03
FOXP3Q9BZS1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 MIR342-201ENST00000362212 99 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 U8.6-201ENST00000364939 135 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 Y_RNA.348-201ENST00000365403 103 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 MIR548D2-201ENST00000384955 97 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 MIR1267-201ENST00000408723 78 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 AC234781.5-201ENST00000508429 271 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 RNU7-181P-201ENST00000517234 74 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 RNA5SP437-201ENST00000517249 129 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 MIR5009-201ENST00000578736 100 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 MIR3163-201ENST00000581592 73 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 MIR5007-201ENST00000583098 95 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 AC103810.6-201ENST00000606708 136 ntBASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.38□□□□□ -2.03
FOXP3Q9BZS1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 RNU6-112P-201ENST00000363599 104 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 RNU4-16P-201ENST00000364737 141 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 Y_RNA.344-201ENST00000365381 112 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 RNU6-905P-201ENST00000384434 107 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 RNU6-296P-201ENST00000384608 107 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 MIR452-201ENST00000385020 85 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 RNA5SP425-201ENST00000410336 112 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 RNA5SP144-201ENST00000410846 116 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 RPL23AP63-201ENST00000498752 471 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 AC068339.1-201ENST00000526965 141 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 AP001318.4-201ENST00000616637 121 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
FOXP3Q9BZS1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.36□□□□□ -2.03
FOXP3Q9BZS1 AL596028.1-201ENST00000326971 197 ntBASIC2.36□□□□□ -2.03
FOXP3Q9BZS1 RNA5SP37-201ENST00000365420 130 ntBASIC2.36□□□□□ -2.03
FOXP3Q9BZS1 Y_RNA.369-201ENST00000365568 117 ntBASIC2.36□□□□□ -2.03
FOXP3Q9BZS1 RNU6-1113P-201ENST00000384348 107 ntBASIC2.36□□□□□ -2.03
FOXP3Q9BZS1 RNA5SP501-201ENST00000410990 112 ntBASIC2.36□□□□□ -2.03
FOXP3Q9BZS1 AC046143.2-201ENST00000609789 160 ntBASIC2.36□□□□□ -2.03
FOXP3Q9BZS1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 MIR302B-201ENST00000362188 73 ntBASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 RNU6-640P-201ENST00000363693 105 ntBASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 SNORA1.2-201ENST00000365189 134 ntBASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 RNU2-7P-201ENST00000410794 178 ntBASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 RN7SKP192-201ENST00000411291 327 ntBASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 UBL5P3-201ENST00000475112 231 ntBASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 AC021506.2-201ENST00000612354 169 ntBASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 262.8 ms