Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MIR548O-201ENST00000408583 114 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 RNU6-735P-201ENST00000410612 107 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 SNORD11-201ENST00000459124 84 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 NBR2-204ENST00000587322 63 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 AL162413.1-201ENST00000603198 110 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 U7.6-201ENST00000610841 64 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 MIR6863-201ENST00000636112 90 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 SNORA25.7-201ENST00000364375 127 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 MIR587-201ENST00000384845 96 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 RNU6-908P-201ENST00000410160 94 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 RNU6-956P-201ENST00000458868 103 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 AC124312.5-201ENST00000604451 268 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 SNORA70.25-201ENST00000612741 95 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 MIR6128-201ENST00000615528 109 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 AL162726.3-218ENST00000636401 95 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 MIR198-201ENST00000637333 62 ntBASIC-0.74□□□□□ -2.53
UPF3BQ9BZI7 RNU6-403P-201ENST00000363163 104 ntBASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 RNU6-811P-201ENST00000384069 107 ntBASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 SNORA40.5-201ENST00000391061 128 ntBASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 MIR1278-201ENST00000408753 81 ntBASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 RPL21P38-201ENST00000418090 167 ntBASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 RNU6-437P-201ENST00000459408 95 ntBASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 AL512360.1-201ENST00000555346 234 ntBASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 MIR4677-201ENST00000584153 80 ntBASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 AC073114.1-201ENST00000612027 490 ntBASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 AC010205.1-201ENST00000616668 449 ntBASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 MIR548AY-201ENST00000617669 107 ntBASIC-0.75□□□□□ -2.53
UPF3BQ9BZI7 MIR148A-201ENST00000362215 68 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 RNU4-50P-201ENST00000364361 141 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 RNA5SP205-201ENST00000364653 136 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 RNU6-535P-201ENST00000384722 107 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 SNORA75.1-201ENST00000391130 148 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 RNU6-332P-201ENST00000391193 108 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 AF228730.4-201ENST00000421457 183 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 RNU6-475P-201ENST00000516073 104 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 RNU6-864P-201ENST00000516256 108 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 AC138749.4-201ENST00000563970 127 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 NAMPTP3-201ENST00000569273 224 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 AC024933.1-201ENST00000608472 348 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 U4.2-201ENST00000618561 85 ntBASIC-0.76□□□□□ -2.53
UPF3BQ9BZI7 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 RNU6-926P-201ENST00000384075 107 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 RNU6-20P-201ENST00000384106 107 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 U8.15-201ENST00000390947 134 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 AL590004.1-201ENST00000405321 300 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 AC074085.1-201ENST00000413598 418 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 AC109327.2-201ENST00000448339 378 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 RPL39P25-201ENST00000449384 154 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 RPS29P24-201ENST00000486345 171 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 MIR378D2-201ENST00000580636 98 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 MIR6507-201ENST00000613630 70 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 AP001282.2-201ENST00000616149 309 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 AL359880.1-201ENST00000621879 266 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 AL162376.1-201ENST00000624117 175 ntBASIC-0.77□□□□□ -2.53
UPF3BQ9BZI7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 RNU6-451P-201ENST00000362921 107 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 RNU6-726P-201ENST00000364680 107 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 SNORA27-201ENST00000384323 126 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 MIR196A1-201ENST00000388006 70 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 RNU6-938P-201ENST00000411285 103 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 FCF1P4-201ENST00000448326 183 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 RNU6-470P-201ENST00000515954 104 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 MTND5P34-201ENST00000568888 325 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 MIR4491-201ENST00000581087 68 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 AC022441.3-201ENST00000605737 136 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 AL662814.1-201ENST00000617364 121 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 MIR4320-201ENST00000636981 65 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 MIR3662-201ENST00000637030 95 ntBASIC-0.78□□□□□ -2.53
UPF3BQ9BZI7 RNU6-626P-201ENST00000363354 107 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 RNU6-708P-201ENST00000384217 107 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 AC096949.1-201ENST00000412047 152 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 RPL30P15-201ENST00000457129 321 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 RNU2-11P-201ENST00000459191 187 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 AC091951.2-201ENST00000500762 203 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 RNU6-566P-201ENST00000516790 107 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 RNU6-273P-201ENST00000516937 96 ntBASIC-0.79□□□□□ -2.54
UPF3BQ9BZI7 MTND3P12-201ENST00000559068 328 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms