Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 MIR15B-201ENST00000385045 98 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 RNU6-735P-201ENST00000410612 107 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 AP1B1P2-201ENST00000416196 106 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 AC108729.3-201ENST00000513484 108 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 RNU7-40P-201ENST00000516397 64 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 SNORD111.1-201ENST00000516421 86 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 MIR4498-201ENST00000577599 66 ntBASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.47□□□□□ -2.17
HERPUD2Q9BSE4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.23-201ENST00000362496 106 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.261-201ENST00000364631 102 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 MT-TT-201ENST00000387460 66 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-1168P-201ENST00000390831 104 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 MTATP6P29-201ENST00000415057 132 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 AC015922.2-201ENST00000435593 184 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 AC048334.1-201ENST00000477975 159 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 AL022345.2-201ENST00000606307 135 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 AC013791.1-201ENST00000616619 62 ntBASIC1.46□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.121-201ENST00000363309 113 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-275P-201ENST00000364910 107 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.497-201ENST00000384447 98 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-939P-201ENST00000384634 107 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 MIR618-201ENST00000385287 98 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-578P-201ENST00000390980 103 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 MTND4LP9-201ENST00000427694 174 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 AC245047.7-201ENST00000440265 293 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 AC009474.2-201ENST00000451383 136 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 RNU7-95P-201ENST00000459222 64 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 AC090142.3-201ENST00000519012 385 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.778-201ENST00000620203 90 ntBASIC1.45□□□□□ -2.18
HERPUD2Q9BSE4 ZNF209P-201ENST00000593450 2304 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-674P-201ENST00000363831 107 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.182-201ENST00000363880 111 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.796-201ENST00000364268 102 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.799-201ENST00000364992 102 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-969P-201ENST00000383900 105 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-449P-201ENST00000383914 107 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-442P-201ENST00000383968 104 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-910P-201ENST00000390844 107 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 RNU2-51P-201ENST00000410708 197 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 AL133373.1-201ENST00000497098 94 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-479P-201ENST00000516348 105 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 RPL23AP91-201ENST00000569211 455 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.24-201ENST00000362508 103 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 U8.1-201ENST00000362843 134 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-1205P-201ENST00000363625 106 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-151P-201ENST00000364158 107 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.251-201ENST00000364551 99 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 RNU4-17P-201ENST00000365598 141 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-144P-201ENST00000383951 107 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 SNORD38C-201ENST00000384381 69 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-1117P-201ENST00000384525 104 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 SNORA20-201ENST00000384662 132 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-239P-201ENST00000390990 99 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 AC023449.1-201ENST00000454464 154 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 SNORA18.7-201ENST00000516910 131 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 SNORA74.3-201ENST00000517108 154 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 MIR4744-201ENST00000581563 82 ntBASIC1.43□□□□□ -2.18
HERPUD2Q9BSE4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.71-201ENST00000362892 104 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.81-201ENST00000362997 102 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.242-201ENST00000364473 110 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 RNA5SP205-201ENST00000364653 136 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.488-201ENST00000384403 102 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 SNORD20-201ENST00000384550 80 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.525-201ENST00000384570 113 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.542-201ENST00000384641 111 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 MIR520C-201ENST00000385005 87 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-383P-201ENST00000410864 94 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 AC005840.1-201ENST00000498412 377 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-1234P-201ENST00000516877 103 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-971P-201ENST00000516920 106 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 AC109810.1-201ENST00000534066 224 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 MIR4431-201ENST00000579990 94 ntBASIC1.42□□□□□ -2.18
HERPUD2Q9BSE4 AC010332.2-201ENST00000613083 1904 ntBASIC1.41□□□□□ -2.18
HERPUD2Q9BSE4 Y_RNA.229-201ENST00000364347 113 ntBASIC1.41□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-215P-201ENST00000365169 102 ntBASIC1.41□□□□□ -2.18
HERPUD2Q9BSE4 MIR616-201ENST00000385293 97 ntBASIC1.41□□□□□ -2.18
HERPUD2Q9BSE4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.41□□□□□ -2.18
HERPUD2Q9BSE4 AL096861.1-201ENST00000610899 123 ntBASIC1.41□□□□□ -2.18
HERPUD2Q9BSE4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 RNU4-11P-201ENST00000365287 132 ntBASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 RNU6-1336P-201ENST00000383886 109 ntBASIC1.4□□□□□ -2.19
HERPUD2Q9BSE4 MIR526A2-201ENST00000390198 65 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms