Protein–RNA interactions for Protein: Q9BRG2

SH2D3A, SH2 domain-containing protein 3A, humanhuman

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3AQ9BRG2 MIR4529-201ENST00000578110 78 ntBASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 MIR5197-201ENST00000583721 112 ntBASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
SH2D3AQ9BRG2 SNORA63.4-201ENST00000362763 126 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 SNORD58C-201ENST00000365223 64 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 SNORD18B-201ENST00000365659 72 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-442P-201ENST00000383968 104 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-1056P-201ENST00000383996 107 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-429P-201ENST00000384582 108 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-440P-201ENST00000390882 105 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-1064P-201ENST00000410626 104 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 RNA5SP450-201ENST00000411206 102 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-938P-201ENST00000411285 103 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 AL035461.1-201ENST00000421490 332 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 MTATP6P21-201ENST00000440681 189 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 AC069257.2-201ENST00000441819 155 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-781P-201ENST00000516377 101 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 SNORD45.4-201ENST00000516629 73 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-113P-201ENST00000516653 101 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 MIR3683-201ENST00000580847 82 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 AC108081.1-201ENST00000604358 221 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 AL022345.2-201ENST00000606307 135 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 AC027279.3-201ENST00000625055 122 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 U6.95-201ENST00000636931 70 ntBASIC1.87□□□□□ -2.11
SH2D3AQ9BRG2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 snoU2-30.1-201ENST00000365012 70 ntBASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 Y_RNA.547-201ENST00000384654 119 ntBASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-476P-201ENST00000384726 107 ntBASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 MIR548O-201ENST00000408583 114 ntBASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-830P-201ENST00000516353 107 ntBASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 IGKV1-22-201ENST00000524313 326 ntBASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 MIR4303-201ENST00000581299 66 ntBASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 MIR6129-201ENST00000616087 109 ntBASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 AC134878.1-201ENST00000619901 243 ntBASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SH2D3AQ9BRG2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SH2D3AQ9BRG2 STAG3L5P-204ENST00000443759 179 ntBASIC1.85□□□□□ -2.11
SH2D3AQ9BRG2 HMGN2P32-201ENST00000444648 269 ntBASIC1.85□□□□□ -2.11
SH2D3AQ9BRG2 RPS26P48-201ENST00000491713 339 ntBASIC1.85□□□□□ -2.11
SH2D3AQ9BRG2 RN7SKP19-201ENST00000516016 252 ntBASIC1.85□□□□□ -2.11
SH2D3AQ9BRG2 SNORD33.1-201ENST00000516213 88 ntBASIC1.85□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-589P-201ENST00000516485 107 ntBASIC1.85□□□□□ -2.11
SH2D3AQ9BRG2 RNU7-25P-201ENST00000516544 62 ntBASIC1.85□□□□□ -2.11
SH2D3AQ9BRG2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.85□□□□□ -2.11
SH2D3AQ9BRG2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.85□□□□□ -2.11
SH2D3AQ9BRG2 SNORA28-201ENST00000606769 126 ntBASIC1.85□□□□□ -2.11
SH2D3AQ9BRG2 SNORD14E-201ENST00000364009 85 ntBASIC1.84□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-296P-201ENST00000384608 107 ntBASIC1.84□□□□□ -2.11
SH2D3AQ9BRG2 RNY4P18-201ENST00000391107 89 ntBASIC1.84□□□□□ -2.11
SH2D3AQ9BRG2 AC108667.1-201ENST00000428618 249 ntBASIC1.84□□□□□ -2.11
SH2D3AQ9BRG2 AC108729.3-201ENST00000513484 108 ntBASIC1.84□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-1061P-201ENST00000516530 99 ntBASIC1.84□□□□□ -2.11
SH2D3AQ9BRG2 RNU6-1149P-201ENST00000516810 97 ntBASIC1.84□□□□□ -2.11
SH2D3AQ9BRG2 RNA5SP437-201ENST00000517249 129 ntBASIC1.84□□□□□ -2.11
SH2D3AQ9BRG2 AP000942.3-201ENST00000603702 160 ntBASIC1.84□□□□□ -2.11
SH2D3AQ9BRG2 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
SH2D3AQ9BRG2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
SH2D3AQ9BRG2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 Y_RNA.4-201ENST00000362333 112 ntBASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 Y_RNA.37-201ENST00000362606 108 ntBASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 RNU6-112P-201ENST00000363599 104 ntBASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 RNU6-755P-201ENST00000364400 103 ntBASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 Y_RNA.265-201ENST00000364677 108 ntBASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 CYCTP-201ENST00000504253 315 ntBASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 MTND5P34-201ENST00000568888 325 ntBASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 MIR4287-201ENST00000579398 78 ntBASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SH2D3AQ9BRG2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 RNU6-833P-201ENST00000363486 107 ntBASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 SNORD115-28-201ENST00000363931 81 ntBASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 Y_RNA.440-201ENST00000384120 114 ntBASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 RNU6-424P-201ENST00000384367 105 ntBASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 MIR520A-201ENST00000384862 85 ntBASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 RN7SKP200-201ENST00000410564 320 ntBASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 AC087499.4-201ENST00000448505 178 ntBASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 AC114811.1-201ENST00000507207 168 ntBASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 Y_RNA.709-201ENST00000516952 92 ntBASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.82□□□□□ -2.12
SH2D3AQ9BRG2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SH2D3AQ9BRG2 RNU6-1084P-201ENST00000362498 107 ntBASIC1.81□□□□□ -2.12
SH2D3AQ9BRG2 RNU6-1189P-201ENST00000383958 107 ntBASIC1.81□□□□□ -2.12
SH2D3AQ9BRG2 RNU6-950P-201ENST00000384651 107 ntBASIC1.81□□□□□ -2.12
SH2D3AQ9BRG2 AC063976.4-201ENST00000421971 163 ntBASIC1.81□□□□□ -2.12
SH2D3AQ9BRG2 CALM2P4-201ENST00000430810 426 ntBASIC1.81□□□□□ -2.12
SH2D3AQ9BRG2 SNORD36C-201ENST00000516733 66 ntBASIC1.81□□□□□ -2.12
SH2D3AQ9BRG2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.81□□□□□ -2.12
SH2D3AQ9BRG2 U1.36-201ENST00000620684 176 ntBASIC1.81□□□□□ -2.12
SH2D3AQ9BRG2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.81□□□□□ -2.12
SH2D3AQ9BRG2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms