Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 Y_RNA.337-201ENST00000365312 102 ntBASIC1.41□□□□□ -2.18
NPAS1Q99742 RNU6-1189P-201ENST00000383958 107 ntBASIC1.41□□□□□ -2.18
NPAS1Q99742 AF228730.3-201ENST00000436691 102 ntBASIC1.41□□□□□ -2.18
NPAS1Q99742 RNU4-57P-201ENST00000515980 135 ntBASIC1.41□□□□□ -2.18
NPAS1Q99742 MIR3124-201ENST00000582636 67 ntBASIC1.41□□□□□ -2.18
NPAS1Q99742 AC097639.2-201ENST00000603159 172 ntBASIC1.41□□□□□ -2.18
NPAS1Q99742 AL353997.5-201ENST00000618886 171 ntBASIC1.41□□□□□ -2.18
NPAS1Q99742 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.41□□□□□ -2.18
NPAS1Q99742 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.4□□□□□ -2.19
NPAS1Q99742 RNU6-682P-201ENST00000363843 106 ntBASIC1.4□□□□□ -2.19
NPAS1Q99742 RNU1-42P-201ENST00000364033 160 ntBASIC1.4□□□□□ -2.19
NPAS1Q99742 Y_RNA.240-201ENST00000364469 95 ntBASIC1.4□□□□□ -2.19
NPAS1Q99742 SNORA1-201ENST00000384107 130 ntBASIC1.4□□□□□ -2.19
NPAS1Q99742 SNORA51.10-201ENST00000384418 136 ntBASIC1.4□□□□□ -2.19
NPAS1Q99742 SNORD37.2-201ENST00000391075 66 ntBASIC1.4□□□□□ -2.19
NPAS1Q99742 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.4□□□□□ -2.19
NPAS1Q99742 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.4□□□□□ -2.19
NPAS1Q99742 MIR4769-201ENST00000584126 77 ntBASIC1.4□□□□□ -2.19
NPAS1Q99742 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
NPAS1Q99742 Y_RNA.150-201ENST00000363562 102 ntBASIC1.39□□□□□ -2.19
NPAS1Q99742 Y_RNA.410-201ENST00000383992 113 ntBASIC1.39□□□□□ -2.19
NPAS1Q99742 MIR548A2-201ENST00000384956 97 ntBASIC1.39□□□□□ -2.19
NPAS1Q99742 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.39□□□□□ -2.19
NPAS1Q99742 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.39□□□□□ -2.19
NPAS1Q99742 RNU7-41P-201ENST00000515917 61 ntBASIC1.39□□□□□ -2.19
NPAS1Q99742 SNORD36C-201ENST00000516733 66 ntBASIC1.39□□□□□ -2.19
NPAS1Q99742 RNU7-70P-201ENST00000516941 66 ntBASIC1.39□□□□□ -2.19
NPAS1Q99742 AC090821.2-201ENST00000523552 176 ntBASIC1.39□□□□□ -2.19
NPAS1Q99742 BX248123.2-201ENST00000606318 124 ntBASIC1.39□□□□□ -2.19
NPAS1Q99742 AL096861.1-201ENST00000610899 123 ntBASIC1.39□□□□□ -2.19
NPAS1Q99742 AC008133.2-201ENST00000624540 351 ntBASIC1.39□□□□□ -2.19
NPAS1Q99742 RNU6-60P-201ENST00000364792 103 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 SNORA70.7-201ENST00000384159 133 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 SNORA27-201ENST00000384323 126 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 Y_RNA.542-201ENST00000384641 111 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 RNU6-239P-201ENST00000390990 99 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 SNORA40.5-201ENST00000391061 128 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 RPS26P48-201ENST00000491713 339 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 AC074198.2-201ENST00000508153 258 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 RNU6-958P-201ENST00000516995 106 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 MIR4791-201ENST00000607666 84 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 AC243994.1-201ENST00000618627 109 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 MIR4251-201ENST00000635819 61 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 MIR6844-201ENST00000637122 62 ntBASIC1.38□□□□□ -2.19
NPAS1Q99742 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
NPAS1Q99742 RNU4-62P-201ENST00000410125 130 ntBASIC1.37□□□□□ -2.19
NPAS1Q99742 AC108667.1-201ENST00000428618 249 ntBASIC1.37□□□□□ -2.19
NPAS1Q99742 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.37□□□□□ -2.19
NPAS1Q99742 MIR3192-201ENST00000584920 77 ntBASIC1.37□□□□□ -2.19
NPAS1Q99742 AC098479.1-201ENST00000609225 154 ntBASIC1.37□□□□□ -2.19
NPAS1Q99742 AC104465.1-201ENST00000611365 139 ntBASIC1.37□□□□□ -2.19
NPAS1Q99742 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
NPAS1Q99742 MIR302B-201ENST00000362188 73 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-34-201ENST00000362441 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-12-201ENST00000362583 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-29-201ENST00000362834 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-9-201ENST00000362912 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-21-201ENST00000362963 81 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-14-201ENST00000363090 81 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORA25.3-201ENST00000363205 127 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-13-201ENST00000363358 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-41-201ENST00000363608 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-11-201ENST00000363616 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-5-201ENST00000363633 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-39-201ENST00000363694 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-4-201ENST00000363810 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-16-201ENST00000363887 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-6-201ENST00000363942 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 RNA5SP48-201ENST00000363969 126 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-42-201ENST00000364273 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 RNU6-978P-201ENST00000364371 103 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-15-201ENST00000364809 81 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-1-201ENST00000364961 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-26-201ENST00000365067 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-10-201ENST00000365073 81 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-43-201ENST00000365503 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-36-201ENST00000365629 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 Y_RNA.393-201ENST00000383936 102 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 Y_RNA.537-201ENST00000384626 109 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD77.3-201ENST00000391113 65 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 RNA5SP127-201ENST00000411051 133 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 AL133373.1-201ENST00000497098 94 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 AC005840.1-201ENST00000498412 377 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORA31.2-201ENST00000516019 134 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 RNU6-165P-201ENST00000517170 99 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 SNORD115-40-201ENST00000606510 82 ntBASIC1.36□□□□□ -2.19
NPAS1Q99742 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
NPAS1Q99742 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NPAS1Q99742 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
NPAS1Q99742 Y_RNA.8-201ENST00000362353 102 ntBASIC1.35□□□□□ -2.19
NPAS1Q99742 Y_RNA.351-201ENST00000365436 96 ntBASIC1.35□□□□□ -2.19
NPAS1Q99742 Y_RNA.494-201ENST00000384432 111 ntBASIC1.35□□□□□ -2.19
NPAS1Q99742 RNU6-768P-201ENST00000384683 107 ntBASIC1.35□□□□□ -2.19
NPAS1Q99742 MIR222-201ENST00000384992 110 ntBASIC1.35□□□□□ -2.19
NPAS1Q99742 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
NPAS1Q99742 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
NPAS1Q99742 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.35□□□□□ -2.19
NPAS1Q99742 RPS29P29-201ENST00000456396 171 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms