Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RNU6-203P-201ENST00000384038 104 ntBASIC1.91□□□□□ -2.1
PNKPQ96T60 MIR660-201ENST00000385235 97 ntBASIC1.91□□□□□ -2.1
PNKPQ96T60 RNU6-360P-201ENST00000390944 104 ntBASIC1.91□□□□□ -2.1
PNKPQ96T60 RNU6-938P-201ENST00000411285 103 ntBASIC1.91□□□□□ -2.1
PNKPQ96T60 RNU5E-3P-201ENST00000515913 68 ntBASIC1.91□□□□□ -2.1
PNKPQ96T60 Y_RNA.692-201ENST00000516627 105 ntBASIC1.91□□□□□ -2.1
PNKPQ96T60 RNU6-1149P-201ENST00000516810 97 ntBASIC1.91□□□□□ -2.1
PNKPQ96T60 MIR3121-201ENST00000579680 77 ntBASIC1.91□□□□□ -2.1
PNKPQ96T60 MIR5197-201ENST00000583721 112 ntBASIC1.91□□□□□ -2.1
PNKPQ96T60 AC078899.2-201ENST00000595282 212 ntBASIC1.91□□□□□ -2.1
PNKPQ96T60 AL513423.1-201ENST00000621695 132 ntBASIC1.91□□□□□ -2.1
PNKPQ96T60 Y_RNA.410-201ENST00000383992 113 ntBASIC1.9□□□□□ -2.11
PNKPQ96T60 SNORA22C-201ENST00000384614 134 ntBASIC1.9□□□□□ -2.11
PNKPQ96T60 RNU6-1154P-201ENST00000391001 104 ntBASIC1.9□□□□□ -2.11
PNKPQ96T60 AL603914.1-201ENST00000401964 204 ntBASIC1.9□□□□□ -2.11
PNKPQ96T60 RNU2-51P-201ENST00000410708 197 ntBASIC1.9□□□□□ -2.11
PNKPQ96T60 RNU4-57P-201ENST00000515980 135 ntBASIC1.9□□□□□ -2.11
PNKPQ96T60 RNA5SP236-201ENST00000516169 116 ntBASIC1.9□□□□□ -2.11
PNKPQ96T60 SNORA25.15-201ENST00000516487 89 ntBASIC1.9□□□□□ -2.11
PNKPQ96T60 SCARNA15-202ENST00000516881 127 ntBASIC1.9□□□□□ -2.11
PNKPQ96T60 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.9□□□□□ -2.11
PNKPQ96T60 RNU6-235P-201ENST00000362644 107 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 RNU6-1189P-201ENST00000383958 107 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 RNU6-1081P-201ENST00000384537 107 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 Y_RNA.525-201ENST00000384570 113 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 RNU6-1168P-201ENST00000390831 104 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 RNU6-1333P-201ENST00000516162 93 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 RNU6-313P-201ENST00000516317 112 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 RNU6-479P-201ENST00000516348 105 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 AP003484.1-201ENST00000530974 250 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.89□□□□□ -2.11
PNKPQ96T60 Y_RNA.757-201ENST00000578934 114 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 MIR548AI-201ENST00000579940 88 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 AC084768.2-201ENST00000622736 221 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 AC095038.3-201ENST00000634439 195 ntBASIC1.89□□□□□ -2.11
PNKPQ96T60 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.89□□□□□ -2.11
PNKPQ96T60 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
PNKPQ96T60 MIR424-201ENST00000362227 98 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 Y_RNA.127-201ENST00000363386 109 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 SNORA2.2-201ENST00000365473 135 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 SNORD116-14-201ENST00000383894 92 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 SNORD116-17-201ENST00000383929 92 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 RNU6-439P-201ENST00000384188 106 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 RNU6-80P-201ENST00000384195 107 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 SNORD116-15-201ENST00000384445 92 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 SNORD116-19-201ENST00000384729 92 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 MIR526A1-201ENST00000384897 85 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 MIR9-3-201ENST00000385084 90 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 RNA5SP212-201ENST00000391223 107 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.88□□□□□ -2.11
PNKPQ96T60 AC008267.6-201ENST00000441664 139 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 RNU7-107P-201ENST00000459121 61 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 Y_RNA.651-201ENST00000459380 103 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 RNU7-181P-201ENST00000517234 74 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.88□□□□□ -2.11
PNKPQ96T60 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
PNKPQ96T60 AL022345.2-201ENST00000606307 135 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 AL773524.1-201ENST00000614065 229 ntBASIC1.88□□□□□ -2.11
PNKPQ96T60 Y_RNA.114-201ENST00000363265 113 ntBASIC1.87□□□□□ -2.11
PNKPQ96T60 RNU6-457P-201ENST00000363999 107 ntBASIC1.87□□□□□ -2.11
PNKPQ96T60 MIR452-201ENST00000385020 85 ntBASIC1.87□□□□□ -2.11
PNKPQ96T60 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.87□□□□□ -2.11
PNKPQ96T60 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.87□□□□□ -2.11
PNKPQ96T60 RPS29P11-201ENST00000496507 171 ntBASIC1.87□□□□□ -2.11
PNKPQ96T60 RNU6-830P-201ENST00000516353 107 ntBASIC1.87□□□□□ -2.11
PNKPQ96T60 MIR4287-201ENST00000579398 78 ntBASIC1.87□□□□□ -2.11
PNKPQ96T60 MIR3683-201ENST00000580847 82 ntBASIC1.87□□□□□ -2.11
PNKPQ96T60 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.87□□□□□ -2.11
PNKPQ96T60 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PNKPQ96T60 AL442644.1-201ENST00000454390 3105 ntBASIC1.86□□□□□ -2.11
PNKPQ96T60 Y_RNA.280-201ENST00000364765 112 ntBASIC1.86□□□□□ -2.11
PNKPQ96T60 RNA5SP190-201ENST00000365222 118 ntBASIC1.86□□□□□ -2.11
PNKPQ96T60 Y_RNA.440-201ENST00000384120 114 ntBASIC1.86□□□□□ -2.11
PNKPQ96T60 Y_RNA.494-201ENST00000384432 111 ntBASIC1.86□□□□□ -2.11
PNKPQ96T60 MIR194-1-201ENST00000384892 85 ntBASIC1.86□□□□□ -2.11
PNKPQ96T60 AC087499.4-201ENST00000448505 178 ntBASIC1.86□□□□□ -2.11
PNKPQ96T60 SNORA18.7-201ENST00000516910 131 ntBASIC1.86□□□□□ -2.11
PNKPQ96T60 SUMO2P16-201ENST00000519475 264 ntBASIC1.86□□□□□ -2.11
PNKPQ96T60 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.86□□□□□ -2.11
PNKPQ96T60 AC106754.2-201ENST00000623006 233 ntBASIC1.86□□□□□ -2.11
PNKPQ96T60 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PNKPQ96T60 Y_RNA.241-201ENST00000364470 117 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 Y_RNA.338-201ENST00000365320 114 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 MIR136-201ENST00000385207 82 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 U8.17-201ENST00000391292 132 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 AL627390.1-201ENST00000396055 340 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 AC244636.1-201ENST00000421152 228 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 AC108667.1-201ENST00000428618 249 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 MTATP6P21-201ENST00000440681 189 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 AL158147.1-201ENST00000443970 75 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 RNU6-659P-201ENST00000516454 104 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 RNU6-250P-201ENST00000516958 103 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 MIR8081-201ENST00000611533 95 ntBASIC1.85□□□□□ -2.11
PNKPQ96T60 AC008555.8-201ENST00000623602 2168 ntBASIC1.84□□□□□ -2.11
PNKPQ96T60 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
PNKPQ96T60 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PNKPQ96T60 AC004965.1-201ENST00000413033 213 ntBASIC1.84□□□□□ -2.11
PNKPQ96T60 SNORD13-201ENST00000459299 104 ntBASIC1.84□□□□□ -2.11
PNKPQ96T60 AC022254.1-201ENST00000567857 235 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms