Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 SNORA31.17-201ENST00000516953 127 ntBASIC1.92□□□□□ -2.1
HAPLN3Q96S86 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.92□□□□□ -2.1
HAPLN3Q96S86 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.92□□□□□ -2.1
HAPLN3Q96S86 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HAPLN3Q96S86 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HAPLN3Q96S86 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HAPLN3Q96S86 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HAPLN3Q96S86 Y_RNA.140-201ENST00000363474 103 ntBASIC1.91□□□□□ -2.1
HAPLN3Q96S86 SNORD20-201ENST00000384550 80 ntBASIC1.91□□□□□ -2.1
HAPLN3Q96S86 Y_RNA.563-201ENST00000384707 108 ntBASIC1.91□□□□□ -2.1
HAPLN3Q96S86 RNU6-1031P-201ENST00000384773 107 ntBASIC1.91□□□□□ -2.1
HAPLN3Q96S86 Y_RNA.629-201ENST00000411368 105 ntBASIC1.91□□□□□ -2.1
HAPLN3Q96S86 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
HAPLN3Q96S86 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.91□□□□□ -2.1
HAPLN3Q96S86 Y_RNA.712-201ENST00000517011 92 ntBASIC1.91□□□□□ -2.1
HAPLN3Q96S86 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.91□□□□□ -2.1
HAPLN3Q96S86 MIR4709-201ENST00000577272 72 ntBASIC1.91□□□□□ -2.1
HAPLN3Q96S86 Y_RNA.757-201ENST00000578934 114 ntBASIC1.91□□□□□ -2.1
HAPLN3Q96S86 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
HAPLN3Q96S86 AL359881.1-201ENST00000602916 267 ntBASIC1.91□□□□□ -2.1
HAPLN3Q96S86 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HAPLN3Q96S86 Y_RNA.336-201ENST00000365307 109 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 Y_RNA.338-201ENST00000365320 114 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 Y_RNA.353-201ENST00000365440 108 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 SNORD18B-201ENST00000365659 72 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 MIR17-201ENST00000385012 84 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 Y_RNA.630-201ENST00000411370 108 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.9□□□□□ -2.11
HAPLN3Q96S86 RNA5SP168-201ENST00000516642 112 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 RNU6-1149P-201ENST00000516810 97 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 AC090049.2-201ENST00000550377 109 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 AC022254.1-201ENST00000567857 235 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 AP000942.3-201ENST00000603702 160 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 AL022345.2-201ENST00000606307 135 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 MIR6845-201ENST00000613182 61 ntBASIC1.9□□□□□ -2.11
HAPLN3Q96S86 Y_RNA.37-201ENST00000362606 108 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 RNU6-424P-201ENST00000384367 105 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 RNU6-163P-201ENST00000384396 106 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 MIR802-201ENST00000390235 94 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 SNORA40.5-201ENST00000391061 128 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 Y_RNA.617-201ENST00000410920 90 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 RNU5E-3P-201ENST00000515913 68 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 SNORD36C-201ENST00000516733 66 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 IGKV1-22-201ENST00000524313 326 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 MIR5197-201ENST00000583721 112 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 AC108081.1-201ENST00000604358 221 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 AC134878.1-201ENST00000619901 243 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 AL442644.1-201ENST00000454390 3105 ntBASIC1.89□□□□□ -2.11
HAPLN3Q96S86 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HAPLN3Q96S86 SNORD115-28-201ENST00000363931 81 ntBASIC1.88□□□□□ -2.11
HAPLN3Q96S86 Y_RNA.273-201ENST00000364703 102 ntBASIC1.88□□□□□ -2.11
HAPLN3Q96S86 SNORA40.18-201ENST00000391200 128 ntBASIC1.88□□□□□ -2.11
HAPLN3Q96S86 RPL23AP6-201ENST00000446637 472 ntBASIC1.88□□□□□ -2.11
HAPLN3Q96S86 AC099513.1-201ENST00000490423 301 ntBASIC1.88□□□□□ -2.11
HAPLN3Q96S86 CYCTP-201ENST00000504253 315 ntBASIC1.88□□□□□ -2.11
HAPLN3Q96S86 AC108729.3-201ENST00000513484 108 ntBASIC1.88□□□□□ -2.11
HAPLN3Q96S86 RNU6-772P-201ENST00000516042 105 ntBASIC1.88□□□□□ -2.11
HAPLN3Q96S86 AC027279.3-201ENST00000625055 122 ntBASIC1.88□□□□□ -2.11
HAPLN3Q96S86 RNU6-215P-201ENST00000365169 102 ntBASIC1.87□□□□□ -2.11
HAPLN3Q96S86 Y_RNA.410-201ENST00000383992 113 ntBASIC1.87□□□□□ -2.11
HAPLN3Q96S86 AC003989.2-201ENST00000440224 169 ntBASIC1.87□□□□□ -2.11
HAPLN3Q96S86 RNU7-34P-201ENST00000459394 64 ntBASIC1.87□□□□□ -2.11
HAPLN3Q96S86 RN7SKP179-201ENST00000516126 217 ntBASIC1.87□□□□□ -2.11
HAPLN3Q96S86 RNU6-781P-201ENST00000516377 101 ntBASIC1.87□□□□□ -2.11
HAPLN3Q96S86 MIR4713-201ENST00000582691 75 ntBASIC1.87□□□□□ -2.11
HAPLN3Q96S86 AC021506.2-201ENST00000612354 169 ntBASIC1.87□□□□□ -2.11
HAPLN3Q96S86 MIR3914-2-201ENST00000637339 95 ntBASIC1.87□□□□□ -2.11
HAPLN3Q96S86 RNU6-661P-201ENST00000362409 107 ntBASIC1.86□□□□□ -2.11
HAPLN3Q96S86 RNU1-17P-201ENST00000363022 152 ntBASIC1.86□□□□□ -2.11
HAPLN3Q96S86 RNU6-1189P-201ENST00000383958 107 ntBASIC1.86□□□□□ -2.11
HAPLN3Q96S86 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
HAPLN3Q96S86 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
HAPLN3Q96S86 HMGN2P32-201ENST00000444648 269 ntBASIC1.86□□□□□ -2.11
HAPLN3Q96S86 AC093850.1-201ENST00000454121 251 ntBASIC1.86□□□□□ -2.11
HAPLN3Q96S86 RPS29P11-201ENST00000496507 171 ntBASIC1.86□□□□□ -2.11
HAPLN3Q96S86 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.86□□□□□ -2.11
HAPLN3Q96S86 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
HAPLN3Q96S86 AC015726.2-201ENST00000620112 122 ntBASIC1.86□□□□□ -2.11
HAPLN3Q96S86 AL513423.1-201ENST00000621695 132 ntBASIC1.86□□□□□ -2.11
HAPLN3Q96S86 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HAPLN3Q96S86 Y_RNA.81-201ENST00000362997 102 ntBASIC1.85□□□□□ -2.11
HAPLN3Q96S86 RNU6-833P-201ENST00000363486 107 ntBASIC1.85□□□□□ -2.11
HAPLN3Q96S86 Y_RNA.440-201ENST00000384120 114 ntBASIC1.85□□□□□ -2.11
HAPLN3Q96S86 Y_RNA.494-201ENST00000384432 111 ntBASIC1.85□□□□□ -2.11
HAPLN3Q96S86 RNU6-429P-201ENST00000384582 108 ntBASIC1.85□□□□□ -2.11
HAPLN3Q96S86 AC015922.2-201ENST00000435593 184 ntBASIC1.85□□□□□ -2.11
HAPLN3Q96S86 RN7SKP19-201ENST00000516016 252 ntBASIC1.85□□□□□ -2.11
HAPLN3Q96S86 RNU7-12P-201ENST00000516030 62 ntBASIC1.85□□□□□ -2.11
HAPLN3Q96S86 RNU6-830P-201ENST00000516353 107 ntBASIC1.85□□□□□ -2.11
HAPLN3Q96S86 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.85□□□□□ -2.11
HAPLN3Q96S86 SNORD58C-201ENST00000365223 64 ntBASIC1.84□□□□□ -2.11
HAPLN3Q96S86 SNORA2.2-201ENST00000365473 135 ntBASIC1.84□□□□□ -2.11
HAPLN3Q96S86 MIRLET7F2-201ENST00000385277 83 ntBASIC1.84□□□□□ -2.11
HAPLN3Q96S86 MTATP6P29-201ENST00000415057 132 ntBASIC1.84□□□□□ -2.11
HAPLN3Q96S86 MTATP6P21-201ENST00000440681 189 ntBASIC1.84□□□□□ -2.11
HAPLN3Q96S86 PGBD4P5-201ENST00000445958 426 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms