Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNU6-597P-201ENST00000365620 102 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 RNU6-187P-201ENST00000384139 106 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 MIR653-201ENST00000385279 96 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 SNORD41-201ENST00000386967 70 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 MIR764-201ENST00000390811 85 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 SNORD77.3-201ENST00000391113 65 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 RNU4-62P-201ENST00000410125 130 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 AC006461.1-201ENST00000412637 326 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 AL591806.2-201ENST00000433122 173 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 AC009474.2-201ENST00000451383 136 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 RNU6-1299P-201ENST00000516316 100 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 RNU6-1270P-201ENST00000517128 108 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 MIR378D2-201ENST00000580636 98 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 AL365205.2-201ENST00000594586 68 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
ZIM3Q96PE6 Y_RNA.8-201ENST00000362353 102 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 SNORA25.8-201ENST00000364831 128 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 RNY1P5-201ENST00000383890 115 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 RNU6-950P-201ENST00000384651 107 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 MIR569-201ENST00000385228 96 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 MIR548O-201ENST00000408583 114 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 MIR1267-201ENST00000408723 78 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 AF228730.3-201ENST00000436691 102 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 AC107027.2-201ENST00000512197 115 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 RNU6-830P-201ENST00000516353 107 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 SNORD116-25-201ENST00000516517 92 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 SCARNA15-202ENST00000516881 127 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 SUMO2P16-201ENST00000519475 264 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
ZIM3Q96PE6 AC019288.1-201ENST00000557918 224 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 AL353770.2-201ENST00000620024 78 ntBASIC1.05□□□□□ -2.24
ZIM3Q96PE6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.05□□□□□ -2.24
ZIM3Q96PE6 RNU6-508P-201ENST00000363231 103 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 Y_RNA.393-201ENST00000383936 102 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 SNORD116-18-201ENST00000383961 92 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 RNU6-442P-201ENST00000383968 104 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 RNU6-163P-201ENST00000384396 106 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 MIR516B2-201ENST00000385190 85 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 SNORD28B-201ENST00000390993 75 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 MIR891A-201ENST00000401237 79 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 SNORA11.2-201ENST00000408318 127 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.04□□□□□ -2.24
ZIM3Q96PE6 RNU7-95P-201ENST00000459222 64 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.04□□□□□ -2.24
ZIM3Q96PE6 RNU2-13P-201ENST00000515909 113 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 RNU7-12P-201ENST00000516030 62 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 RNA5SP272-201ENST00000516095 111 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 SNORD36C-201ENST00000516733 66 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 MIR4662B-201ENST00000579498 81 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 AC106754.2-201ENST00000623006 233 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 SNORD3E-202ENST00000627253 216 ntBASIC1.04□□□□□ -2.24
ZIM3Q96PE6 MTND5P32-201ENST00000560711 1802 ntBASIC1.03□□□□□ -2.24
ZIM3Q96PE6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
ZIM3Q96PE6 MIR23A-201ENST00000385245 73 ntBASIC1.03□□□□□ -2.24
ZIM3Q96PE6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.03□□□□□ -2.24
ZIM3Q96PE6 RNU6-693P-201ENST00000516134 107 ntBASIC1.03□□□□□ -2.24
ZIM3Q96PE6 RNA5SP236-201ENST00000516169 116 ntBASIC1.03□□□□□ -2.24
ZIM3Q96PE6 MIR3133-201ENST00000583157 78 ntBASIC1.03□□□□□ -2.24
ZIM3Q96PE6 DNAJC19P2-201ENST00000593340 302 ntBASIC1.03□□□□□ -2.24
ZIM3Q96PE6 Y_RNA.778-201ENST00000620203 90 ntBASIC1.03□□□□□ -2.24
ZIM3Q96PE6 RNU6-1084P-201ENST00000362498 107 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.37-201ENST00000362606 108 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 RNU6-199P-201ENST00000362954 107 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 SNORD14E-201ENST00000364009 85 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 RNU4-11P-201ENST00000365287 132 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.497-201ENST00000384447 98 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
ZIM3Q96PE6 RNU6-588P-201ENST00000410281 105 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 RNU2-70P-201ENST00000410718 179 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.02□□□□□ -2.25
ZIM3Q96PE6 HMGN2P32-201ENST00000444648 269 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 RNU6-365P-201ENST00000517113 106 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 RNU6-165P-201ENST00000517170 99 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.02□□□□□ -2.25
ZIM3Q96PE6 MIR3129-201ENST00000581095 76 ntBASIC1.02□□□□□ -2.25
ZIM3Q96PE6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
ZIM3Q96PE6 RNU6-151P-201ENST00000364158 107 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 SNORD1A-201ENST00000364968 72 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.337-201ENST00000365312 102 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 RNU6-449P-201ENST00000383914 107 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.400-201ENST00000383963 111 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 RNU6-746P-201ENST00000384112 109 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 MIR624-201ENST00000385217 97 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 RPS27P16-201ENST00000425758 201 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 RPL30P7-201ENST00000479312 323 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.01□□□□□ -2.25
ZIM3Q96PE6 SNORA18.4-201ENST00000516440 124 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 RNU6-504P-201ENST00000516568 104 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 RNU7-181P-201ENST00000517234 74 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 AC015726.2-201ENST00000620112 122 ntBASIC1.01□□□□□ -2.25
ZIM3Q96PE6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.01□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.52-201ENST00000362760 96 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 SNORD33-201ENST00000362761 85 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 SNORD115-28-201ENST00000363931 81 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.215-201ENST00000364204 112 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.280-201ENST00000364765 112 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 282.4 ms