Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 MIR520H-201ENST00000385126 88 ntBASIC0.46□□□□□ -2.34
ZNF560Q96MR9 MIR140-201ENST00000385282 100 ntBASIC0.46□□□□□ -2.34
ZNF560Q96MR9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.46□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.666-201ENST00000516187 112 ntBASIC0.46□□□□□ -2.34
ZNF560Q96MR9 MIR4724-201ENST00000579485 89 ntBASIC0.46□□□□□ -2.34
ZNF560Q96MR9 AL049861.1-201ENST00000603130 150 ntBASIC0.46□□□□□ -2.34
ZNF560Q96MR9 RAC1P9-201ENST00000604990 392 ntBASIC0.46□□□□□ -2.34
ZNF560Q96MR9 AL589743.1-201ENST00000551932 2712 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 MIR367-201ENST00000362299 68 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 SNORD115-28-201ENST00000363931 81 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 SNORA40.5-201ENST00000391061 128 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 RNA5SP193-201ENST00000410353 107 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 SNORD83.1-201ENST00000411362 77 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 AC090844.1-201ENST00000422019 156 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 RNU7-73P-201ENST00000458743 63 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 SNORD77.4-201ENST00000516158 81 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 RNU6-126P-201ENST00000516685 103 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.45□□□□□ -2.34
ZNF560Q96MR9 MIR4771-2-201ENST00000577758 74 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 MIR5688-201ENST00000580619 83 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 MIR4804-201ENST00000581683 73 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 MIR4771-1-201ENST00000582617 74 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 AP000942.4-201ENST00000604811 241 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.804-201ENST00000615262 101 ntBASIC0.45□□□□□ -2.34
ZNF560Q96MR9 MIR369-201ENST00000362155 70 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 RNU6-1272P-201ENST00000362776 107 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 RNU6-290P-201ENST00000365212 101 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 RNU6-326P-201ENST00000365480 107 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.394-201ENST00000383942 103 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.587-201ENST00000391210 103 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 RNU6-101P-201ENST00000410323 104 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 MTCO2P12-201ENST00000427426 682 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 RNU7-62P-201ENST00000458856 62 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 RNU2-31P-201ENST00000516954 155 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 RNU6-958P-201ENST00000516995 106 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 AC007751.1-201ENST00000529260 376 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.44□□□□□ -2.34
ZNF560Q96MR9 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.105-201ENST00000363182 111 ntBASIC0.43□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.486-201ENST00000384398 107 ntBASIC0.43□□□□□ -2.34
ZNF560Q96MR9 RNU6-342P-201ENST00000384521 104 ntBASIC0.43□□□□□ -2.34
ZNF560Q96MR9 SNORD38B-201ENST00000384690 67 ntBASIC0.43□□□□□ -2.34
ZNF560Q96MR9 AC022028.1-201ENST00000412054 408 ntBASIC0.43□□□□□ -2.34
ZNF560Q96MR9 PMCHL1-202ENST00000423102 261 ntBASIC0.43□□□□□ -2.34
ZNF560Q96MR9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.43□□□□□ -2.34
ZNF560Q96MR9 MTCO2P24-201ENST00000515611 426 ntBASIC0.43□□□□□ -2.34
ZNF560Q96MR9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.43□□□□□ -2.34
ZNF560Q96MR9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.43□□□□□ -2.34
ZNF560Q96MR9 MIR4676-201ENST00000583078 72 ntBASIC0.43□□□□□ -2.34
ZNF560Q96MR9 MIR8055-201ENST00000610739 97 ntBASIC0.43□□□□□ -2.34
ZNF560Q96MR9 SNORD38B-202ENST00000625943 69 ntBASIC0.43□□□□□ -2.34
ZNF560Q96MR9 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.43□□□□□ -2.34
ZNF560Q96MR9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.42□□□□□ -2.34
ZNF560Q96MR9 MIR18A-201ENST00000362310 71 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.31-201ENST00000362574 102 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.380-201ENST00000365663 111 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 RNY1P8-201ENST00000383970 114 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.419-201ENST00000384041 102 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 MIR216A-201ENST00000385063 110 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 MIR613-201ENST00000385248 95 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 MIR526A2-201ENST00000390198 65 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 SNORA53-201ENST00000391141 249 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 RNU7-56P-201ENST00000458744 62 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 AC091959.1-201ENST00000495857 238 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 AC037487.3-201ENST00000606668 112 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 Z97988.1-201ENST00000637697 135 ntBASIC0.42□□□□□ -2.34
ZNF560Q96MR9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
ZNF560Q96MR9 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
ZNF560Q96MR9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.41□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.28-201ENST00000362554 111 ntBASIC0.41□□□□□ -2.34
ZNF560Q96MR9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
ZNF560Q96MR9 SNORD24-201ENST00000383884 75 ntBASIC0.41□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.389-201ENST00000383924 113 ntBASIC0.41□□□□□ -2.34
ZNF560Q96MR9 RNU6-121P-201ENST00000410525 99 ntBASIC0.41□□□□□ -2.34
ZNF560Q96MR9 RNU6-938P-201ENST00000411285 103 ntBASIC0.41□□□□□ -2.34
ZNF560Q96MR9 MIR18B-201ENST00000454574 71 ntBASIC0.41□□□□□ -2.34
ZNF560Q96MR9 SNORA18.4-201ENST00000516440 124 ntBASIC0.41□□□□□ -2.34
ZNF560Q96MR9 RNU7-53P-201ENST00000516705 60 ntBASIC0.41□□□□□ -2.34
ZNF560Q96MR9 MIR3612-201ENST00000579753 87 ntBASIC0.41□□□□□ -2.34
ZNF560Q96MR9 AC020891.4-201ENST00000605745 93 ntBASIC0.41□□□□□ -2.34
ZNF560Q96MR9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
ZNF560Q96MR9 SNORA25.1-201ENST00000362326 128 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 Y_RNA.37-201ENST00000362606 108 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 SNORD114-23-201ENST00000363536 72 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 RNU6-450P-201ENST00000364654 107 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 Y_RNA.293-201ENST00000364908 93 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 RNU6-514P-201ENST00000384208 107 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 SNORA27-201ENST00000384323 126 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 AC015818.7-201ENST00000428754 109 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 AC087499.7-201ENST00000441958 109 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 RNU6-693P-201ENST00000516134 107 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 SNORA27.4-201ENST00000516650 95 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 SNORA40.15-201ENST00000516884 107 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 RN7SL793P-201ENST00000583259 296 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.4□□□□□ -2.35
ZNF560Q96MR9 MTND4P29-201ENST00000503122 1372 ntBASIC0.4□□□□□ -2.35
ZNF560Q96MR9 Y_RNA.26-201ENST00000362539 101 ntBASIC0.39□□□□□ -2.35
ZNF560Q96MR9 Y_RNA.217-201ENST00000364214 105 ntBASIC0.39□□□□□ -2.35
ZNF560Q96MR9 MIR518F-201ENST00000384973 87 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms