Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNU6-493P-201ENST00000391321 108 ntBASIC1.42□□□□□ -2.18
CCDC138Q96M89 SNORA79-201ENST00000408376 140 ntBASIC1.42□□□□□ -2.18
CCDC138Q96M89 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
CCDC138Q96M89 AC087499.4-201ENST00000448505 178 ntBASIC1.42□□□□□ -2.18
CCDC138Q96M89 AC107297.1-201ENST00000459991 176 ntBASIC1.42□□□□□ -2.18
CCDC138Q96M89 AC007751.1-201ENST00000529260 376 ntBASIC1.42□□□□□ -2.18
CCDC138Q96M89 DNAJC19P9-201ENST00000555084 351 ntBASIC1.42□□□□□ -2.18
CCDC138Q96M89 MIR4251-201ENST00000635819 61 ntBASIC1.42□□□□□ -2.18
CCDC138Q96M89 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC138Q96M89 U8.1-201ENST00000362843 134 ntBASIC1.41□□□□□ -2.18
CCDC138Q96M89 RNA5SP264-201ENST00000363115 107 ntBASIC1.41□□□□□ -2.18
CCDC138Q96M89 SNORD114-26-201ENST00000363543 72 ntBASIC1.41□□□□□ -2.18
CCDC138Q96M89 Y_RNA.537-201ENST00000384626 109 ntBASIC1.41□□□□□ -2.18
CCDC138Q96M89 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CCDC138Q96M89 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.41□□□□□ -2.18
CCDC138Q96M89 RNU6-847P-201ENST00000411115 108 ntBASIC1.41□□□□□ -2.18
CCDC138Q96M89 AC109810.1-201ENST00000534066 224 ntBASIC1.41□□□□□ -2.18
CCDC138Q96M89 AL512598.1-201ENST00000610158 273 ntBASIC1.41□□□□□ -2.18
CCDC138Q96M89 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC138Q96M89 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CCDC138Q96M89 Y_RNA.66-201ENST00000362862 102 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 Y_RNA.91-201ENST00000363042 107 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 Y_RNA.121-201ENST00000363309 113 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 RNA5SP325-201ENST00000363756 130 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 Y_RNA.188-201ENST00000363952 111 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 RNU6-923P-201ENST00000364753 107 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 SNORA80D-201ENST00000384488 135 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 MIR518F-201ENST00000384973 87 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 SNORD12-201ENST00000391002 90 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 AP1B1P2-201ENST00000416196 106 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 SNORD79.1-201ENST00000516069 84 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 RNU6-1270P-201ENST00000517128 108 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC138Q96M89 AP003716.2-201ENST00000528260 108 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 AC097639.2-201ENST00000603159 172 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 AC134878.1-201ENST00000619901 243 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 AC027335.2-201ENST00000624030 375 ntBASIC1.4□□□□□ -2.19
CCDC138Q96M89 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC138Q96M89 Y_RNA.363-201ENST00000365529 113 ntBASIC1.39□□□□□ -2.19
CCDC138Q96M89 SNORA51.10-201ENST00000384418 136 ntBASIC1.39□□□□□ -2.19
CCDC138Q96M89 MIR570-201ENST00000384917 97 ntBASIC1.39□□□□□ -2.19
CCDC138Q96M89 MIR548A2-201ENST00000384956 97 ntBASIC1.39□□□□□ -2.19
CCDC138Q96M89 MIR618-201ENST00000385287 98 ntBASIC1.39□□□□□ -2.19
CCDC138Q96M89 RNU6-561P-201ENST00000516222 102 ntBASIC1.39□□□□□ -2.19
CCDC138Q96M89 RNU6-197P-201ENST00000516680 100 ntBASIC1.39□□□□□ -2.19
CCDC138Q96M89 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC138Q96M89 MIR103A2-201ENST00000362154 78 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-34-201ENST00000362441 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-12-201ENST00000362583 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 Y_RNA.37-201ENST00000362606 108 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-29-201ENST00000362834 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-9-201ENST00000362912 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-21-201ENST00000362963 81 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-14-201ENST00000363090 81 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORA25.3-201ENST00000363205 127 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-13-201ENST00000363358 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-41-201ENST00000363608 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-11-201ENST00000363616 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-5-201ENST00000363633 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-39-201ENST00000363694 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-4-201ENST00000363810 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-16-201ENST00000363887 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-6-201ENST00000363942 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 Y_RNA.200-201ENST00000364018 102 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-42-201ENST00000364273 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 Y_RNA.241-201ENST00000364470 117 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-15-201ENST00000364809 81 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-1-201ENST00000364961 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-26-201ENST00000365067 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-10-201ENST00000365073 81 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 Y_RNA.327-201ENST00000365201 102 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-43-201ENST00000365503 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-36-201ENST00000365629 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 RNU6-578P-201ENST00000390980 103 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 RNU4-43P-201ENST00000410628 137 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 AL591704.2-201ENST00000421658 181 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC138Q96M89 AL121914.1-201ENST00000450188 156 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 RNU2-13P-201ENST00000515909 113 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 RNU7-40P-201ENST00000516397 64 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 RNU6-1271P-201ENST00000517049 105 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 MIR4452-201ENST00000583004 71 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 RNU2-4P-201ENST00000606190 192 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 SNORD115-40-201ENST00000606510 82 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 MIR4791-201ENST00000607666 84 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 MIR6779-201ENST00000617283 64 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 AC243994.1-201ENST00000618627 109 ntBASIC1.38□□□□□ -2.19
CCDC138Q96M89 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC138Q96M89 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
CCDC138Q96M89 Y_RNA.36-201ENST00000362602 112 ntBASIC1.37□□□□□ -2.19
CCDC138Q96M89 Y_RNA.540-201ENST00000384638 111 ntBASIC1.37□□□□□ -2.19
CCDC138Q96M89 Y_RNA.571-201ENST00000384753 98 ntBASIC1.37□□□□□ -2.19
CCDC138Q96M89 MT-TG-201ENST00000387429 68 ntBASIC1.37□□□□□ -2.19
CCDC138Q96M89 SNORA40.5-201ENST00000391061 128 ntBASIC1.37□□□□□ -2.19
CCDC138Q96M89 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
CCDC138Q96M89 RNU7-95P-201ENST00000459222 64 ntBASIC1.37□□□□□ -2.19
CCDC138Q96M89 Y_RNA.797-201ENST00000515977 94 ntBASIC1.37□□□□□ -2.19
CCDC138Q96M89 AP003484.1-201ENST00000530974 250 ntBASIC1.37□□□□□ -2.19
CCDC138Q96M89 MIR4308-201ENST00000580634 81 ntBASIC1.37□□□□□ -2.19
CCDC138Q96M89 Y_RNA.83-201ENST00000363005 113 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 348.1 ms