Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 U1.36-201ENST00000620684 176 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 RNU6-834P-201ENST00000362367 110 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 RNU6-1084P-201ENST00000362498 107 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 RNU6-888P-201ENST00000363010 101 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 RNU6-1019P-201ENST00000364424 107 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 SNORD24-201ENST00000383884 75 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 RNA5SP212-201ENST00000391223 107 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 MIR891A-201ENST00000401237 79 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 AC003989.2-201ENST00000440224 169 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 SNORA25.15-201ENST00000516487 89 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 RNA5SP437-201ENST00000517249 129 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 MTND5P34-201ENST00000568888 325 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 MIR4255-201ENST00000579351 72 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 AC087685.1-201ENST00000587507 141 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 AL022345.2-201ENST00000606307 135 ntBASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.84□□□□□ -2.11
VCPIP1Q96JH7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
VCPIP1Q96JH7 MTND5P32-201ENST00000560711 1802 ntBASIC1.84□□□□□ -2.12
VCPIP1Q96JH7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.83□□□□□ -2.12
VCPIP1Q96JH7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.83□□□□□ -2.12
VCPIP1Q96JH7 Y_RNA.280-201ENST00000364765 112 ntBASIC1.83□□□□□ -2.12
VCPIP1Q96JH7 RNA5SP109-201ENST00000391010 116 ntBASIC1.83□□□□□ -2.12
VCPIP1Q96JH7 RNU6-321P-201ENST00000410912 106 ntBASIC1.83□□□□□ -2.12
VCPIP1Q96JH7 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
VCPIP1Q96JH7 AC245047.3-201ENST00000429428 127 ntBASIC1.83□□□□□ -2.12
VCPIP1Q96JH7 SNRPGP13-201ENST00000442212 177 ntBASIC1.83□□□□□ -2.12
VCPIP1Q96JH7 SNORA31.17-201ENST00000516953 127 ntBASIC1.83□□□□□ -2.12
VCPIP1Q96JH7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.83□□□□□ -2.12
VCPIP1Q96JH7 MIR6129-201ENST00000616087 109 ntBASIC1.83□□□□□ -2.12
VCPIP1Q96JH7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 SNORD14E-201ENST00000364009 85 ntBASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 Y_RNA.242-201ENST00000364473 110 ntBASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 RNU6-1292P-201ENST00000383856 107 ntBASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 RNU6-429P-201ENST00000384582 108 ntBASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 RNU6-476P-201ENST00000384726 107 ntBASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 SNORA40.5-201ENST00000391061 128 ntBASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 Y_RNA.630-201ENST00000411370 108 ntBASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 BTF3P4-201ENST00000418852 495 ntBASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 AF228730.3-201ENST00000436691 102 ntBASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 AC108081.1-201ENST00000604358 221 ntBASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 MIR3914-2-201ENST00000637339 95 ntBASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VCPIP1Q96JH7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 RNU6-647P-201ENST00000364243 107 ntBASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 SNORA63D-201ENST00000364359 132 ntBASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 SNORA4.2-201ENST00000365313 147 ntBASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 RNU6-1144P-201ENST00000384247 104 ntBASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 MIR548A2-201ENST00000384956 97 ntBASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 SNORD77.3-201ENST00000391113 65 ntBASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 MTATP6P21-201ENST00000440681 189 ntBASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 Y_RNA.651-201ENST00000459380 103 ntBASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 AC084768.2-201ENST00000622736 221 ntBASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.81□□□□□ -2.12
VCPIP1Q96JH7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 snoU2-30.1-201ENST00000365012 70 ntBASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 RNU6-442P-201ENST00000383968 104 ntBASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 MIR518F-201ENST00000384973 87 ntBASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 RNU6-440P-201ENST00000390882 105 ntBASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 RNA5SP482-201ENST00000391269 118 ntBASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 MIR548O-201ENST00000408583 114 ntBASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 RNU6-781P-201ENST00000516377 101 ntBASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 SNORD45.4-201ENST00000516629 73 ntBASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 RNU6-1149P-201ENST00000516810 97 ntBASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 MIR4762-201ENST00000585261 75 ntBASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 U6.95-201ENST00000636931 70 ntBASIC1.8□□□□□ -2.12
VCPIP1Q96JH7 RNU6-661P-201ENST00000362409 107 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 SNORA63.4-201ENST00000362763 126 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 U8.5-201ENST00000364528 136 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 SNORD58C-201ENST00000365223 64 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 MIR520A-201ENST00000384862 85 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 AL627390.1-201ENST00000396055 340 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 Y_RNA.617-201ENST00000410920 90 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 STAG3L5P-204ENST00000443759 179 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 RN7SKP19-201ENST00000516016 252 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 SNORD33.1-201ENST00000516213 88 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 RNU6-250P-201ENST00000516958 103 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 AC022254.1-201ENST00000567857 235 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 MIR3122-201ENST00000577243 73 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 MIR3683-201ENST00000580847 82 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 MIR8081-201ENST00000611533 95 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 MIR8054-201ENST00000620877 86 ntBASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VCPIP1Q96JH7 RNY1P10-201ENST00000363268 113 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 RNU6-268P-201ENST00000364174 107 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 RNU6-439P-201ENST00000384188 106 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 RNY4P18-201ENST00000391107 89 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 RNU4-62P-201ENST00000410125 130 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 RNU2-7P-201ENST00000410794 178 ntBASIC1.78□□□□□ -2.12
VCPIP1Q96JH7 HSPE1P9-201ENST00000440046 311 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms