Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MIR548A2-201ENST00000384956 97 ntBASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 MIR136-201ENST00000385207 82 ntBASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 RNU7-120P-201ENST00000459334 63 ntBASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.797-201ENST00000515977 94 ntBASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 RNU6-1219P-201ENST00000516143 112 ntBASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 SNORA81.3-201ENST00000517283 198 ntBASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 MRPS18CP4-201ENST00000535821 231 ntBASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 MIR3124-201ENST00000582636 67 ntBASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
PDLIM5Q96HC4 MIR378A-201ENST00000362177 66 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 RNA5SP99-201ENST00000364020 114 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 RNU6-275P-201ENST00000364910 107 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.432-201ENST00000384087 111 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 SNORD38C-201ENST00000384381 69 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 MIR15B-201ENST00000385045 98 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.793-201ENST00000411222 111 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 MTND5P15-201ENST00000434246 349 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 AL121914.1-201ENST00000450188 156 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 RNU4-57P-201ENST00000515980 135 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 RNU7-25P-201ENST00000516544 62 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 RNU6-197P-201ENST00000516680 100 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 RNU6-126P-201ENST00000516685 103 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 RNU6-365P-201ENST00000517113 106 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 AP002392.1-201ENST00000537692 208 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 AC072026.1-201ENST00000605023 201 ntBASIC1.11□□□□□ -2.23
PDLIM5Q96HC4 Y_RNA.23-201ENST00000362496 106 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 RNU6-888P-201ENST00000363010 101 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 RNU6-682P-201ENST00000363843 106 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 RNU6-312P-201ENST00000364629 107 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 SNORD24-201ENST00000383884 75 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 MIR518F-201ENST00000384973 87 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 MIR802-201ENST00000390235 94 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 RNU6-910P-201ENST00000390844 107 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 RNU6-907P-201ENST00000390924 102 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 RNU2-64P-201ENST00000411315 191 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 RNU6-693P-201ENST00000516134 107 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 RNU6-504P-201ENST00000516568 104 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 SNORA74.3-201ENST00000517108 154 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 MIR548AR-201ENST00000582191 57 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
PDLIM5Q96HC4 U8.17-201ENST00000391292 132 ntBASIC1.09□□□□□ -2.23
PDLIM5Q96HC4 MIR548O-201ENST00000408583 114 ntBASIC1.09□□□□□ -2.23
PDLIM5Q96HC4 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
PDLIM5Q96HC4 RNU2-70P-201ENST00000410718 179 ntBASIC1.09□□□□□ -2.23
PDLIM5Q96HC4 RNU6-938P-201ENST00000411285 103 ntBASIC1.09□□□□□ -2.23
PDLIM5Q96HC4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.09□□□□□ -2.23
PDLIM5Q96HC4 SNORD123-201ENST00000459473 70 ntBASIC1.09□□□□□ -2.23
PDLIM5Q96HC4 RPS23P4-201ENST00000487908 423 ntBASIC1.09□□□□□ -2.23
PDLIM5Q96HC4 UBL5P1-201ENST00000507979 193 ntBASIC1.09□□□□□ -2.23
PDLIM5Q96HC4 RNU6-861P-201ENST00000516745 106 ntBASIC1.09□□□□□ -2.23
PDLIM5Q96HC4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
PDLIM5Q96HC4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 Y_RNA.240-201ENST00000364469 95 ntBASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 SNORA1-201ENST00000384107 130 ntBASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 SNORA26-201ENST00000391286 122 ntBASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 AC245047.7-201ENST00000440265 293 ntBASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 snoU13.25-201ENST00000458945 104 ntBASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 AC048334.1-201ENST00000477975 159 ntBASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 SNORA18.7-201ENST00000516910 131 ntBASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 MIR4431-201ENST00000579990 94 ntBASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 AL157834.3-201ENST00000615543 103 ntBASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.08□□□□□ -2.24
PDLIM5Q96HC4 RNU6-978P-201ENST00000364371 103 ntBASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 SNORD28B-201ENST00000390993 75 ntBASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 AF228730.3-201ENST00000436691 102 ntBASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 RNU2-13P-201ENST00000515909 113 ntBASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 RNU6-182P-201ENST00000516970 105 ntBASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 RNU7-181P-201ENST00000517234 74 ntBASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 MIR378D2-201ENST00000580636 98 ntBASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 MIR3192-201ENST00000584920 77 ntBASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 AC015726.2-201ENST00000620112 122 ntBASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
PDLIM5Q96HC4 Y_RNA.37-201ENST00000362606 108 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 SNORD115-28-201ENST00000363931 81 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 RNU6-643P-201ENST00000384018 107 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 Y_RNA.441-201ENST00000384123 112 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 MIR19B1-201ENST00000384829 87 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 SNORA79-201ENST00000408376 140 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 AC063976.4-201ENST00000421971 163 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 SEPT7P4-201ENST00000437076 306 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 AC074198.2-201ENST00000508153 258 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 RNU6-1270P-201ENST00000517128 108 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 MIR4764-201ENST00000580680 88 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 AL096861.1-201ENST00000610899 123 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 FTX_2.1-201ENST00000618816 94 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 AL391516.1-201ENST00000554380 2449 ntBASIC1.06□□□□□ -2.24
PDLIM5Q96HC4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
PDLIM5Q96HC4 SNORA80D-201ENST00000384488 135 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms