Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AL391903.3-201ENST00000612158 163 ntBASIC1.35□□□□□ -2.19
SH3KBP1Q96B97 AL353770.2-201ENST00000620024 78 ntBASIC1.35□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.7-201ENST00000362352 102 ntBASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.182-201ENST00000363880 111 ntBASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 RNU6-728P-201ENST00000365375 104 ntBASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.476-201ENST00000384347 108 ntBASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 RNU4-57P-201ENST00000515980 135 ntBASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 RNU7-40P-201ENST00000516397 64 ntBASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 AC130289.1-201ENST00000577321 73 ntBASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 SNORA4-201ENST00000584302 138 ntBASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 MIR6504-201ENST00000613520 61 ntBASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 MIR6734-201ENST00000621166 68 ntBASIC1.34□□□□□ -2.19
SH3KBP1Q96B97 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
SH3KBP1Q96B97 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.191-201ENST00000363972 113 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 RNU6-392P-201ENST00000364926 101 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.370-201ENST00000365589 108 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 RNU6-47P-201ENST00000383866 107 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 RNY3P5-201ENST00000384127 102 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 RNU4-70P-201ENST00000384579 139 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 RNU6-910P-201ENST00000390844 107 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 SNORA31.4-201ENST00000516049 129 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 RNU6-830P-201ENST00000516353 107 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 RNU7-43P-201ENST00000516554 64 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 RNU6-504P-201ENST00000516568 104 ntBASIC1.33□□□□□ -2.2
SH3KBP1Q96B97 MIR411-201ENST00000362239 96 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 RNU6-103P-201ENST00000363686 107 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 SNORD115-28-201ENST00000363931 81 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.241-201ENST00000364470 117 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.494-201ENST00000384432 111 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.571-201ENST00000384753 98 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 MIR518F-201ENST00000384973 87 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 RNU6-578P-201ENST00000390980 103 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 RNU6-1054P-201ENST00000411293 104 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 AC245047.7-201ENST00000440265 293 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 AL133373.1-201ENST00000497098 94 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 AC022559.1-201ENST00000520905 205 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 AC109810.1-201ENST00000534066 224 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 AC108706.1-201ENST00000611053 297 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 AC008133.2-201ENST00000624540 351 ntBASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.32□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.274-201ENST00000364714 101 ntBASIC1.31□□□□□ -2.2
SH3KBP1Q96B97 MIR548A2-201ENST00000384956 97 ntBASIC1.31□□□□□ -2.2
SH3KBP1Q96B97 SNORA79-201ENST00000408376 140 ntBASIC1.31□□□□□ -2.2
SH3KBP1Q96B97 RNU2-55P-201ENST00000411146 174 ntBASIC1.31□□□□□ -2.2
SH3KBP1Q96B97 MIR4452-201ENST00000583004 71 ntBASIC1.31□□□□□ -2.2
SH3KBP1Q96B97 AC009779.6-201ENST00000603972 165 ntBASIC1.31□□□□□ -2.2
SH3KBP1Q96B97 MIR6078-201ENST00000611069 100 ntBASIC1.31□□□□□ -2.2
SH3KBP1Q96B97 AL442644.1-201ENST00000454390 3105 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.66-201ENST00000362862 102 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 RNY1-201ENST00000364228 113 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 RNU6-42P-201ENST00000384165 107 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.515-201ENST00000384535 112 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 RNU6-126P-201ENST00000516685 103 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 SNORD36C-201ENST00000516733 66 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 RNA5SP102-201ENST00000516865 106 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 SNORA70.22-201ENST00000517160 124 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 AP000942.4-201ENST00000604811 241 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 MIR4251-201ENST00000635819 61 ntBASIC1.3□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.23-201ENST00000362496 106 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.37-201ENST00000362606 108 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.297-201ENST00000364950 91 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.363-201ENST00000365529 113 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 RNU6-918P-201ENST00000391219 106 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 SNORA26-201ENST00000391286 122 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 AF228730.3-201ENST00000436691 102 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 RNU6-197P-201ENST00000516680 100 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 MIR4791-201ENST00000607666 84 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 U6.106-201ENST00000636360 105 ntBASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SH3KBP1Q96B97 RNU6-888P-201ENST00000363010 101 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 RNU6-1020P-201ENST00000363684 107 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 SNORA1.2-201ENST00000365189 134 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.330-201ENST00000365230 109 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 SNORD24-201ENST00000383884 75 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 SNORA1-201ENST00000384107 130 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 SNORA25-201ENST00000384384 134 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 SNORA51.10-201ENST00000384418 136 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 Y_RNA.552-201ENST00000384665 112 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 RNU6-1067P-201ENST00000384752 107 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 RNA5SP153-201ENST00000516498 76 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 AP003484.1-201ENST00000530974 250 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 MIR3129-201ENST00000581095 76 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 AL022345.2-201ENST00000606307 135 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 AC141273.2-201ENST00000618989 130 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 AC012676.2-201ENST00000619258 186 ntBASIC1.28□□□□□ -2.2
SH3KBP1Q96B97 MIR103A2-201ENST00000362154 78 ntBASIC1.27□□□□□ -2.21
SH3KBP1Q96B97 MIR342-201ENST00000362212 99 ntBASIC1.27□□□□□ -2.21
SH3KBP1Q96B97 Y_RNA.412-201ENST00000384001 104 ntBASIC1.27□□□□□ -2.21
SH3KBP1Q96B97 MIR7-2-201ENST00000384970 110 ntBASIC1.27□□□□□ -2.21
SH3KBP1Q96B97 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms