Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 PISRT1.1-201ENST00000616930 107 ntBASIC-0.36□□□□□ -2.47
CCDC112Q8NEF3 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.37□□□□□ -2.47
CCDC112Q8NEF3 RNU6-161P-201ENST00000363051 106 ntBASIC-0.37□□□□□ -2.47
CCDC112Q8NEF3 SNORD28-201ENST00000384706 75 ntBASIC-0.37□□□□□ -2.47
CCDC112Q8NEF3 AC087499.4-201ENST00000448505 178 ntBASIC-0.37□□□□□ -2.47
CCDC112Q8NEF3 RNU7-165P-201ENST00000458864 60 ntBASIC-0.37□□□□□ -2.47
CCDC112Q8NEF3 RNU7-141P-201ENST00000459304 62 ntBASIC-0.37□□□□□ -2.47
CCDC112Q8NEF3 RNU6-504P-201ENST00000516568 104 ntBASIC-0.37□□□□□ -2.47
CCDC112Q8NEF3 RNU7-53P-201ENST00000516705 60 ntBASIC-0.37□□□□□ -2.47
CCDC112Q8NEF3 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 RNU6-269P-201ENST00000391077 97 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 RNU2-14P-201ENST00000411053 191 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 MTND1P29-201ENST00000448112 647 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 AC107399.1-201ENST00000451226 265 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 AC104692.1-201ENST00000472406 90 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 RNU6-135P-201ENST00000516769 101 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 MIR4752-201ENST00000579672 72 ntBASIC-0.38□□□□□ -2.47
CCDC112Q8NEF3 SNORD115-28-201ENST00000363931 81 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 RNY3P11-201ENST00000364153 102 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 SNORA27-201ENST00000384323 126 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 SNORD116-1-201ENST00000384335 95 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 RNU7-159P-201ENST00000459284 62 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 HAR1A.1-201ENST00000459583 118 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 AC006600.1-201ENST00000572529 153 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 MIR3152-201ENST00000579801 74 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 AC005357.1-201ENST00000588399 301 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 AC124312.5-201ENST00000604451 268 ntBASIC-0.39□□□□□ -2.47
CCDC112Q8NEF3 RNU6-801P-201ENST00000364087 105 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 RNU6-708P-201ENST00000384217 107 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 RNU6-510P-201ENST00000391239 108 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 AC024067.1-201ENST00000426199 223 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 RNU7-169P-201ENST00000459456 61 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 RPS29P24-201ENST00000486345 171 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 RNU6-758P-201ENST00000516292 89 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 RNU7-149P-201ENST00000516739 59 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 AC144568.1-201ENST00000520139 137 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 AC138869.1-201ENST00000568623 124 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 MIR4639-201ENST00000584938 69 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 MIR6082-201ENST00000613604 109 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 AP000770.2-201ENST00000623694 100 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 U6.92-201ENST00000636464 89 ntBASIC-0.4□□□□□ -2.47
CCDC112Q8NEF3 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 MTND3P8-201ENST00000412909 339 ntBASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 AC245505.1-201ENST00000556398 224 ntBASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 MIR3145-201ENST00000580727 82 ntBASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 MIR4493-201ENST00000584016 73 ntBASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 AP001282.2-201ENST00000616149 309 ntBASIC-0.41□□□□□ -2.48
CCDC112Q8NEF3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
CCDC112Q8NEF3 SNORA72.4-201ENST00000384174 132 ntBASIC-0.42□□□□□ -2.48
CCDC112Q8NEF3 AL138752.1-201ENST00000452964 351 ntBASIC-0.42□□□□□ -2.48
CCDC112Q8NEF3 SNORD4A-201ENST00000459174 72 ntBASIC-0.42□□□□□ -2.48
CCDC112Q8NEF3 RNU6-765P-201ENST00000516916 99 ntBASIC-0.42□□□□□ -2.48
CCDC112Q8NEF3 RNU7-4P-201ENST00000516961 62 ntBASIC-0.42□□□□□ -2.48
CCDC112Q8NEF3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.42□□□□□ -2.48
CCDC112Q8NEF3 AC244669.1-204ENST00000621564 178 ntBASIC-0.42□□□□□ -2.48
CCDC112Q8NEF3 AC138305.3-201ENST00000624988 240 ntBASIC-0.42□□□□□ -2.48
CCDC112Q8NEF3 AL669831.3-213ENST00000636676 183 ntBASIC-0.42□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.43□□□□□ -2.48
CCDC112Q8NEF3 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.43□□□□□ -2.48
CCDC112Q8NEF3 RNU6-652P-201ENST00000365488 107 ntBASIC-0.43□□□□□ -2.48
CCDC112Q8NEF3 RNU6-291P-201ENST00000384720 107 ntBASIC-0.43□□□□□ -2.48
CCDC112Q8NEF3 U8.15-201ENST00000390947 134 ntBASIC-0.43□□□□□ -2.48
CCDC112Q8NEF3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.43□□□□□ -2.48
CCDC112Q8NEF3 AC096949.1-201ENST00000412047 152 ntBASIC-0.43□□□□□ -2.48
CCDC112Q8NEF3 RNU6-911P-201ENST00000516523 104 ntBASIC-0.43□□□□□ -2.48
CCDC112Q8NEF3 AL021707.8-201ENST00000609428 183 ntBASIC-0.43□□□□□ -2.48
CCDC112Q8NEF3 U2.1-201ENST00000618978 145 ntBASIC-0.43□□□□□ -2.48
CCDC112Q8NEF3 RNU6-403P-201ENST00000363163 104 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 SNORA18.1-201ENST00000363418 128 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 MIR548A2-201ENST00000384956 97 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 MIR501-201ENST00000390204 84 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 SNORD77.3-201ENST00000391113 65 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 MIR548I3-201ENST00000408378 149 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 HMGN2P22-201ENST00000427588 175 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 RNU6-180P-201ENST00000516697 61 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms