Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 MIR1261-201ENST00000408659 82 ntBASIC1.73□□□□□ -2.13
PNLDC1Q8NA58 SNORA31.4-201ENST00000516049 129 ntBASIC1.73□□□□□ -2.13
PNLDC1Q8NA58 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.73□□□□□ -2.13
PNLDC1Q8NA58 MIR4778-201ENST00000577635 80 ntBASIC1.73□□□□□ -2.13
PNLDC1Q8NA58 AL359881.1-201ENST00000602916 267 ntBASIC1.73□□□□□ -2.13
PNLDC1Q8NA58 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.73□□□□□ -2.13
PNLDC1Q8NA58 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.73□□□□□ -2.13
PNLDC1Q8NA58 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.73□□□□□ -2.13
PNLDC1Q8NA58 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 RNU6-647P-201ENST00000364243 107 ntBASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 MIR452-201ENST00000385020 85 ntBASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 MIR516B2-201ENST00000385190 85 ntBASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 AL161935.2-201ENST00000414627 60 ntBASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 RPS26P48-201ENST00000491713 339 ntBASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 RNU5E-3P-201ENST00000515913 68 ntBASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 RN7SKP19-201ENST00000516016 252 ntBASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 RNU7-181P-201ENST00000517234 74 ntBASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 AC022254.1-201ENST00000567857 235 ntBASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 AC095038.3-201ENST00000634439 195 ntBASIC1.72□□□□□ -2.13
PNLDC1Q8NA58 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.71□□□□□ -2.13
PNLDC1Q8NA58 RNU6-349P-201ENST00000362402 107 ntBASIC1.71□□□□□ -2.14
PNLDC1Q8NA58 RNU6-457P-201ENST00000363999 107 ntBASIC1.71□□□□□ -2.14
PNLDC1Q8NA58 RNU6-215P-201ENST00000365169 102 ntBASIC1.71□□□□□ -2.14
PNLDC1Q8NA58 SNORD20-201ENST00000384550 80 ntBASIC1.71□□□□□ -2.14
PNLDC1Q8NA58 U8.17-201ENST00000391292 132 ntBASIC1.71□□□□□ -2.14
PNLDC1Q8NA58 AC019129.1-201ENST00000403786 261 ntBASIC1.71□□□□□ -2.14
PNLDC1Q8NA58 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.71□□□□□ -2.14
PNLDC1Q8NA58 snoU13.26-201ENST00000459452 105 ntBASIC1.71□□□□□ -2.14
PNLDC1Q8NA58 RNU6-113P-201ENST00000516653 101 ntBASIC1.71□□□□□ -2.14
PNLDC1Q8NA58 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.71□□□□□ -2.14
PNLDC1Q8NA58 SNORD3E-202ENST00000627253 216 ntBASIC1.71□□□□□ -2.14
PNLDC1Q8NA58 RNU6-834P-201ENST00000362367 110 ntBASIC1.7□□□□□ -2.14
PNLDC1Q8NA58 SNORD114-1-201ENST00000362705 72 ntBASIC1.7□□□□□ -2.14
PNLDC1Q8NA58 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.7□□□□□ -2.14
PNLDC1Q8NA58 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.7□□□□□ -2.14
PNLDC1Q8NA58 AL096840.1-201ENST00000603287 93 ntBASIC1.7□□□□□ -2.14
PNLDC1Q8NA58 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.7□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-34-201ENST00000362441 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-12-201ENST00000362583 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-29-201ENST00000362834 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-9-201ENST00000362912 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-21-201ENST00000362963 81 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-14-201ENST00000363090 81 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-13-201ENST00000363358 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-41-201ENST00000363608 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-11-201ENST00000363616 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-5-201ENST00000363633 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-39-201ENST00000363694 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-4-201ENST00000363810 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-16-201ENST00000363887 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-6-201ENST00000363942 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-42-201ENST00000364273 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-15-201ENST00000364809 81 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-1-201ENST00000364961 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-26-201ENST00000365067 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-10-201ENST00000365073 81 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-43-201ENST00000365503 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 Y_RNA.366-201ENST00000365540 102 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-36-201ENST00000365629 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 RNU6-439P-201ENST00000384188 106 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORA67.3-201ENST00000384366 140 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 RNU6-429P-201ENST00000384582 108 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 RNA5SP212-201ENST00000391223 107 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 AL627390.1-201ENST00000396055 340 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 snoU13.15-201ENST00000459407 104 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 RNU2-13P-201ENST00000515909 113 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 RNU6-1061P-201ENST00000516530 99 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 AC133485.4-201ENST00000561835 220 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 AC138907.4-201ENST00000570107 226 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 SNORD115-40-201ENST00000606510 82 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 AL773524.1-201ENST00000614065 229 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 ZNF355P-201ENST00000427301 3216 ntBASIC1.69□□□□□ -2.14
PNLDC1Q8NA58 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 RNU6-1123P-201ENST00000362347 106 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 Y_RNA.241-201ENST00000364470 117 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 SNORA27-201ENST00000384323 126 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 MIR136-201ENST00000385207 82 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 SNORD28B-201ENST00000390993 75 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 AL023284.1-201ENST00000403956 276 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 UBL5P3-201ENST00000475112 231 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 RNU6-240P-201ENST00000516098 97 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 SNORD33.1-201ENST00000516213 88 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 RNU6-917P-201ENST00000516294 104 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 SNORA18.7-201ENST00000516910 131 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 AC090821.2-201ENST00000523552 176 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 AC078899.2-201ENST00000595282 212 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 SNRPGP19-201ENST00000603826 189 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 Y_RNA.783-201ENST00000613546 102 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 AC091932.4-201ENST00000623386 200 ntBASIC1.68□□□□□ -2.14
PNLDC1Q8NA58 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
PNLDC1Q8NA58 Y_RNA.351-201ENST00000365436 96 ntBASIC1.67□□□□□ -2.14
PNLDC1Q8NA58 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
PNLDC1Q8NA58 MIR1267-201ENST00000408723 78 ntBASIC1.67□□□□□ -2.14
PNLDC1Q8NA58 RNA5SP489-201ENST00000410986 109 ntBASIC1.67□□□□□ -2.14
PNLDC1Q8NA58 AC004965.1-201ENST00000413033 213 ntBASIC1.67□□□□□ -2.14
PNLDC1Q8NA58 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms