Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DEPDC4Q8N2C3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
DEPDC4Q8N2C3 Y_RNA.10-201ENST00000362371 110 ntBASIC2.79□□□□□ -1.96
DEPDC4Q8N2C3 SNORA80A-201ENST00000363922 136 ntBASIC2.79□□□□□ -1.96
DEPDC4Q8N2C3 SNORD77B-201ENST00000391112 67 ntBASIC2.79□□□□□ -1.96
DEPDC4Q8N2C3 AC003982.1-202ENST00000469928 248 ntBASIC2.79□□□□□ -1.96
DEPDC4Q8N2C3 RNU2-19P-201ENST00000517288 84 ntBASIC2.79□□□□□ -1.96
DEPDC4Q8N2C3 MIR203B-201ENST00000636080 86 ntBASIC2.79□□□□□ -1.96
DEPDC4Q8N2C3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
DEPDC4Q8N2C3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
DEPDC4Q8N2C3 AC096644.4-201ENST00000563417 2912 ntBASIC2.79□□□□□ -1.96
DEPDC4Q8N2C3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 RNU6-457P-201ENST00000363999 107 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 RNU6-301P-201ENST00000384277 107 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 SNORD15B-201ENST00000384714 146 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 RNU6-913P-201ENST00000390913 95 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 SNORA19.1-201ENST00000410656 129 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 AC022018.1-201ENST00000430685 241 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 MTATP8P2-201ENST00000435212 202 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 AC011753.1-201ENST00000451001 220 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 RNA5SP341-201ENST00000516261 117 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 DEFB131E-201ENST00000532329 154 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 MIR4694-201ENST00000578534 80 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 AC245884.12-201ENST00000615364 59 ntBASIC2.78□□□□□ -1.96
DEPDC4Q8N2C3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
DEPDC4Q8N2C3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
DEPDC4Q8N2C3 MIR422A-201ENST00000362286 90 ntBASIC2.77□□□□□ -1.97
DEPDC4Q8N2C3 RNU6-109P-201ENST00000516364 107 ntBASIC2.77□□□□□ -1.97
DEPDC4Q8N2C3 RNU6-184P-201ENST00000516514 107 ntBASIC2.77□□□□□ -1.97
DEPDC4Q8N2C3 RNA5SP33-201ENST00000516687 98 ntBASIC2.77□□□□□ -1.97
DEPDC4Q8N2C3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.77□□□□□ -1.97
DEPDC4Q8N2C3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 RNY3P2-201ENST00000362918 102 ntBASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 RNU6-1099P-201ENST00000363533 107 ntBASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 RNU4-67P-201ENST00000364569 141 ntBASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 RNU6-409P-201ENST00000384114 104 ntBASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 MIR194-1-201ENST00000384892 85 ntBASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 AL023284.1-201ENST00000403956 276 ntBASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 RNU6-733P-201ENST00000410759 104 ntBASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 RPS3AP1-201ENST00000413190 320 ntBASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 Y_RNA.773-201ENST00000607168 90 ntBASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 MIR8055-201ENST00000610739 97 ntBASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
DEPDC4Q8N2C3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
DEPDC4Q8N2C3 Y_RNA.470-201ENST00000384307 117 ntBASIC2.75□□□□□ -1.97
DEPDC4Q8N2C3 Y_RNA.601-201ENST00000410500 113 ntBASIC2.75□□□□□ -1.97
DEPDC4Q8N2C3 SCARNA23-201ENST00000516060 130 ntBASIC2.75□□□□□ -1.97
DEPDC4Q8N2C3 MIR548AE2-201ENST00000583456 67 ntBASIC2.75□□□□□ -1.97
DEPDC4Q8N2C3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.75□□□□□ -1.97
DEPDC4Q8N2C3 AC064859.1-201ENST00000624741 174 ntBASIC2.75□□□□□ -1.97
DEPDC4Q8N2C3 MIR1255B1-201ENST00000636325 63 ntBASIC2.75□□□□□ -1.97
DEPDC4Q8N2C3 MIR622-201ENST00000638396 96 ntBASIC2.75□□□□□ -1.97
DEPDC4Q8N2C3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 Y_RNA.155-201ENST00000363632 101 ntBASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 SNORA71.1-201ENST00000364523 117 ntBASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 RNU6-294P-201ENST00000364999 102 ntBASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 Y_RNA.466-201ENST00000384294 113 ntBASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 MIR653-201ENST00000385279 96 ntBASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 RNU6-1190P-201ENST00000410811 104 ntBASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 AC055731.1-201ENST00000474387 401 ntBASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 MIR7106-201ENST00000612419 65 ntBASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
DEPDC4Q8N2C3 Y_RNA.107-201ENST00000363190 121 ntBASIC2.73□□□□□ -1.97
DEPDC4Q8N2C3 Y_RNA.354-201ENST00000365448 111 ntBASIC2.73□□□□□ -1.97
DEPDC4Q8N2C3 Y_RNA.360-201ENST00000365512 102 ntBASIC2.73□□□□□ -1.97
DEPDC4Q8N2C3 AC004965.1-201ENST00000413033 213 ntBASIC2.73□□□□□ -1.97
DEPDC4Q8N2C3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.73□□□□□ -1.97
DEPDC4Q8N2C3 RNU6-917P-201ENST00000516294 104 ntBASIC2.73□□□□□ -1.97
DEPDC4Q8N2C3 RNU6-1018P-201ENST00000516577 106 ntBASIC2.73□□□□□ -1.97
DEPDC4Q8N2C3 MIR4764-201ENST00000580680 88 ntBASIC2.73□□□□□ -1.97
DEPDC4Q8N2C3 MIR4672-201ENST00000583126 81 ntBASIC2.73□□□□□ -1.97
DEPDC4Q8N2C3 AC008133.2-201ENST00000624540 351 ntBASIC2.73□□□□□ -1.97
DEPDC4Q8N2C3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 SNORA1.1-201ENST00000364671 133 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 RNU6-1131P-201ENST00000364955 107 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 RNA5SP126-201ENST00000365092 109 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 SNORA7.4-201ENST00000384249 137 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 Y_RNA.558-201ENST00000384685 113 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 MIR524-201ENST00000385242 87 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 RNA5SP212-201ENST00000391223 107 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 HMGN2P35-201ENST00000412164 270 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 RPS29P6-201ENST00000438196 145 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 RNU6-322P-201ENST00000516010 103 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 AL513534.2-201ENST00000603836 250 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 Z97988.1-201ENST00000637697 135 ntBASIC2.72□□□□□ -1.97
DEPDC4Q8N2C3 Z82195.2-201ENST00000612348 18351 ntBASIC2.71□□□□□ -1.98
DEPDC4Q8N2C3 AC073325.2-201ENST00000339545 159 ntBASIC2.71□□□□□ -1.98
DEPDC4Q8N2C3 RNU6-832P-201ENST00000363319 107 ntBASIC2.71□□□□□ -1.98
DEPDC4Q8N2C3 SNORA5B-201ENST00000363786 132 ntBASIC2.71□□□□□ -1.98
DEPDC4Q8N2C3 Y_RNA.220-201ENST00000364244 109 ntBASIC2.71□□□□□ -1.98
DEPDC4Q8N2C3 RNU6-203P-201ENST00000384038 104 ntBASIC2.71□□□□□ -1.98
DEPDC4Q8N2C3 SNORD23.1-201ENST00000408212 104 ntBASIC2.71□□□□□ -1.98
DEPDC4Q8N2C3 AC096949.1-201ENST00000412047 152 ntBASIC2.71□□□□□ -1.98
DEPDC4Q8N2C3 AL161935.2-201ENST00000414627 60 ntBASIC2.71□□□□□ -1.98
DEPDC4Q8N2C3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.71□□□□□ -1.98
DEPDC4Q8N2C3 AC107016.2-201ENST00000547968 190 ntBASIC2.71□□□□□ -1.98
DEPDC4Q8N2C3 AC104984.5-201ENST00000586878 94 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms