Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MIR1287-201ENST00000408492 90 ntBASIC0.34□□□□□ -2.36
ZNF546Q86UE3 MIR1252-201ENST00000408861 65 ntBASIC0.34□□□□□ -2.36
ZNF546Q86UE3 AC114737.2-201ENST00000421583 173 ntBASIC0.34□□□□□ -2.36
ZNF546Q86UE3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
ZNF546Q86UE3 MIR3612-201ENST00000579753 87 ntBASIC0.34□□□□□ -2.36
ZNF546Q86UE3 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
ZNF546Q86UE3 uc_338.6-201ENST00000613544 171 ntBASIC0.34□□□□□ -2.36
ZNF546Q86UE3 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
ZNF546Q86UE3 SNORA25.1-201ENST00000362326 128 ntBASIC0.33□□□□□ -2.36
ZNF546Q86UE3 RNU6-42P-201ENST00000384165 107 ntBASIC0.33□□□□□ -2.36
ZNF546Q86UE3 MIR548A2-201ENST00000384956 97 ntBASIC0.33□□□□□ -2.36
ZNF546Q86UE3 RNU6-913P-201ENST00000390913 95 ntBASIC0.33□□□□□ -2.36
ZNF546Q86UE3 RNU6-938P-201ENST00000411285 103 ntBASIC0.33□□□□□ -2.36
ZNF546Q86UE3 AC092628.1-201ENST00000436250 252 ntBASIC0.33□□□□□ -2.36
ZNF546Q86UE3 RNU2-31P-201ENST00000516954 155 ntBASIC0.33□□□□□ -2.36
ZNF546Q86UE3 RNU6-958P-201ENST00000516995 106 ntBASIC0.33□□□□□ -2.36
ZNF546Q86UE3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.33□□□□□ -2.36
ZNF546Q86UE3 MIR6740-201ENST00000618268 113 ntBASIC0.33□□□□□ -2.36
ZNF546Q86UE3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.33□□□□□ -2.36
ZNF546Q86UE3 Z97988.1-201ENST00000637697 135 ntBASIC0.33□□□□□ -2.36
ZNF546Q86UE3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.37-201ENST00000362606 108 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 RNA5SP499-201ENST00000363982 119 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.238-201ENST00000364441 102 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.293-201ENST00000364908 93 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 SNORD24-201ENST00000383884 75 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.419-201ENST00000384041 102 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 RNU6-514P-201ENST00000384208 107 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.486-201ENST00000384398 107 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 RNU6-342P-201ENST00000384521 104 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.541-201ENST00000384640 113 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 SNORA40.5-201ENST00000391061 128 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 RNU6-101P-201ENST00000410323 104 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 RNA5SP247-201ENST00000411181 105 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.32□□□□□ -2.36
ZNF546Q86UE3 MTCO2P24-201ENST00000515611 426 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.721-201ENST00000517207 102 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 AC010332.2-201ENST00000613083 1904 ntBASIC0.32□□□□□ -2.36
ZNF546Q86UE3 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 snoU2_19.2-201ENST00000363024 80 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.217-201ENST00000364214 105 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 RNU6-326P-201ENST00000365480 107 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.389-201ENST00000383924 113 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.394-201ENST00000383942 103 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 RNU6-662P-201ENST00000384253 104 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 SNORA27-201ENST00000384323 126 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 SNORD38B-201ENST00000384690 67 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 MIR526A2-201ENST00000390198 65 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 SNORA53-201ENST00000391141 249 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 AC022028.1-201ENST00000412054 408 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 RNU7-56P-201ENST00000458744 62 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.641-201ENST00000459414 105 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 RPS29P24-201ENST00000486345 171 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 RNU6-229P-201ENST00000516614 102 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 RNU7-53P-201ENST00000516705 60 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.31□□□□□ -2.36
ZNF546Q86UE3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.31□□□□□ -2.36
ZNF546Q86UE3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.31□□□□□ -2.36
ZNF546Q86UE3 AC037487.3-201ENST00000606668 112 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 AL008718.3-201ENST00000610217 321 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 MIR8055-201ENST00000610739 97 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 SNORD38B-202ENST00000625943 69 ntBASIC0.31□□□□□ -2.36
ZNF546Q86UE3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
ZNF546Q86UE3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.28-201ENST00000362554 111 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.380-201ENST00000365663 111 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.509-201ENST00000384506 99 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 MIR938-201ENST00000401216 83 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 HMGN1P33-201ENST00000432945 451 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 MIR18B-201ENST00000454574 71 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 RNU6-693P-201ENST00000516134 107 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 RNU6-126P-201ENST00000516685 103 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 SNORD36C-201ENST00000516733 66 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 SNORA40.15-201ENST00000516884 107 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 AL162730.1-201ENST00000605734 292 ntBASIC0.3□□□□□ -2.36
ZNF546Q86UE3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
ZNF546Q86UE3 RNU6-888P-201ENST00000363010 101 ntBASIC0.29□□□□□ -2.36
ZNF546Q86UE3 SNORD61-201ENST00000384252 73 ntBASIC0.29□□□□□ -2.36
ZNF546Q86UE3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.29□□□□□ -2.36
ZNF546Q86UE3 RNU6-1270P-201ENST00000517128 108 ntBASIC0.29□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.802-201ENST00000614892 130 ntBASIC0.29□□□□□ -2.36
ZNF546Q86UE3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.29□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.116-201ENST00000363292 103 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 SNORA1.1-201ENST00000364671 133 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.276-201ENST00000364732 109 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 RNU1-133P-201ENST00000364867 167 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 MIR215-201ENST00000384858 110 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 MIR588-201ENST00000384900 83 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 MIR518E-201ENST00000385252 88 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 SNORD100-201ENST00000408573 76 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 RNU6-602P-201ENST00000411155 105 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 RPL21P38-201ENST00000418090 167 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 ELOCP20-201ENST00000422460 345 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.28□□□□□ -2.36
ZNF546Q86UE3 Y_RNA.631-201ENST00000459607 101 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 SNORA27.4-201ENST00000516650 95 ntBASIC0.28□□□□□ -2.36
ZNF546Q86UE3 AP003733.2-201ENST00000529409 171 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 241.2 ms