Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
DDX53Q86TM3 RNA5SP445-201ENST00000515889 115 ntBASIC2.05□□□□□ -2.08
DDX53Q86TM3 RNU6-406P-201ENST00000516470 107 ntBASIC2.05□□□□□ -2.08
DDX53Q86TM3 SNORA18.7-201ENST00000516910 131 ntBASIC2.05□□□□□ -2.08
DDX53Q86TM3 AL096840.1-201ENST00000603287 93 ntBASIC2.05□□□□□ -2.08
DDX53Q86TM3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.05□□□□□ -2.08
DDX53Q86TM3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
DDX53Q86TM3 Y_RNA.241-201ENST00000364470 117 ntBASIC2.04□□□□□ -2.08
DDX53Q86TM3 Y_RNA.355-201ENST00000365462 98 ntBASIC2.04□□□□□ -2.08
DDX53Q86TM3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
DDX53Q86TM3 MIR676-201ENST00000390702 67 ntBASIC2.04□□□□□ -2.08
DDX53Q86TM3 AL021397.1-201ENST00000451806 248 ntBASIC2.04□□□□□ -2.08
DDX53Q86TM3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.04□□□□□ -2.08
DDX53Q86TM3 RNU6-1149P-201ENST00000516810 97 ntBASIC2.04□□□□□ -2.08
DDX53Q86TM3 RNU2-60P-201ENST00000517290 128 ntBASIC2.04□□□□□ -2.08
DDX53Q86TM3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.04□□□□□ -2.08
DDX53Q86TM3 SNRPGP19-201ENST00000603826 189 ntBASIC2.04□□□□□ -2.08
DDX53Q86TM3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
DDX53Q86TM3 AP001340.1-201ENST00000624405 217 ntBASIC2.04□□□□□ -2.08
DDX53Q86TM3 AC132825.6-201ENST00000638861 357 ntBASIC2.04□□□□□ -2.08
DDX53Q86TM3 Y_RNA.120-201ENST00000363304 110 ntBASIC2.03□□□□□ -2.08
DDX53Q86TM3 SNORA2.2-201ENST00000365473 135 ntBASIC2.03□□□□□ -2.08
DDX53Q86TM3 SNORD123-201ENST00000459473 70 ntBASIC2.03□□□□□ -2.08
DDX53Q86TM3 AC005908.1-201ENST00000468701 347 ntBASIC2.03□□□□□ -2.08
DDX53Q86TM3 MIR514B-201ENST00000516774 80 ntBASIC2.03□□□□□ -2.08
DDX53Q86TM3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.03□□□□□ -2.08
DDX53Q86TM3 AC015688.6-201ENST00000577737 104 ntBASIC2.03□□□□□ -2.08
DDX53Q86TM3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.02□□□□□ -2.09
DDX53Q86TM3 SNORD18B-201ENST00000365659 72 ntBASIC2.02□□□□□ -2.09
DDX53Q86TM3 Y_RNA.440-201ENST00000384120 114 ntBASIC2.02□□□□□ -2.09
DDX53Q86TM3 Y_RNA.466-201ENST00000384294 113 ntBASIC2.02□□□□□ -2.09
DDX53Q86TM3 Y_RNA.494-201ENST00000384432 111 ntBASIC2.02□□□□□ -2.09
DDX53Q86TM3 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
DDX53Q86TM3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.02□□□□□ -2.09
DDX53Q86TM3 AC245517.4-201ENST00000448601 281 ntBASIC2.02□□□□□ -2.09
DDX53Q86TM3 SCARNA15-202ENST00000516881 127 ntBASIC2.02□□□□□ -2.09
DDX53Q86TM3 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
DDX53Q86TM3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
DDX53Q86TM3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.02□□□□□ -2.09
DDX53Q86TM3 MIR337-201ENST00000362281 93 ntBASIC2.01□□□□□ -2.09
DDX53Q86TM3 MIR30A-201ENST00000385092 71 ntBASIC2.01□□□□□ -2.09
DDX53Q86TM3 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
DDX53Q86TM3 AC108667.1-201ENST00000428618 249 ntBASIC2.01□□□□□ -2.09
DDX53Q86TM3 AC003989.2-201ENST00000440224 169 ntBASIC2.01□□□□□ -2.09
DDX53Q86TM3 AC090821.2-201ENST00000523552 176 ntBASIC2.01□□□□□ -2.09
DDX53Q86TM3 MIR3683-201ENST00000580847 82 ntBASIC2.01□□□□□ -2.09
DDX53Q86TM3 MIR548AR-201ENST00000582191 57 ntBASIC2.01□□□□□ -2.09
DDX53Q86TM3 snoU13.31-201ENST00000607291 104 ntBASIC2.01□□□□□ -2.09
DDX53Q86TM3 AC011603.4-201ENST00000611325 277 ntBASIC2.01□□□□□ -2.09
DDX53Q86TM3 MIR8063-201ENST00000621930 81 ntBASIC2.01□□□□□ -2.09
DDX53Q86TM3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
DDX53Q86TM3 AL157777.2-201ENST00000258070 137 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 RNU6-508P-201ENST00000363231 103 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 MIR653-201ENST00000385279 96 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 SNORD28B-201ENST00000390993 75 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 SNORA40.5-201ENST00000391061 128 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 snoU13.9-201ENST00000458927 103 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 RPS26P48-201ENST00000491713 339 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 RNU6-322P-201ENST00000516010 103 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 Y_RNA.690-201ENST00000516603 95 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 SNORA74.3-201ENST00000517108 154 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 AC090049.2-201ENST00000550377 109 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2□□□□□ -2.09
DDX53Q86TM3 TUG1_4.1-201ENST00000619464 181 ntBASIC2□□□□□ -2.09
DDX53Q86TM3 SNORD115-34-201ENST00000362441 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-12-201ENST00000362583 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-29-201ENST00000362834 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-9-201ENST00000362912 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-21-201ENST00000362963 81 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-14-201ENST00000363090 81 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-13-201ENST00000363358 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-41-201ENST00000363608 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-11-201ENST00000363616 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-5-201ENST00000363633 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-39-201ENST00000363694 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-4-201ENST00000363810 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-16-201ENST00000363887 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-6-201ENST00000363942 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-42-201ENST00000364273 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-15-201ENST00000364809 81 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-1-201ENST00000364961 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-26-201ENST00000365067 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-10-201ENST00000365073 81 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORA1.2-201ENST00000365189 134 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-43-201ENST00000365503 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-36-201ENST00000365629 82 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORA27-201ENST00000384323 126 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORA19-201ENST00000384737 128 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 MIR9-3-201ENST00000385084 90 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORA17.3-201ENST00000391159 129 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 RNA5SP338-201ENST00000410495 85 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 RNU5E-3P-201ENST00000515913 68 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 RNA5SP236-201ENST00000516169 116 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 RNU6-971P-201ENST00000516920 106 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORA44.1-201ENST00000517031 108 ntBASIC1.99□□□□□ -2.09
DDX53Q86TM3 SNORD115-40-201ENST00000606510 82 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 243 ms