Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 MIR548D2-201ENST00000384955 97 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 MIR660-201ENST00000385235 97 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 SNORD28B-201ENST00000390993 75 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 AL513328.1-201ENST00000446460 224 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 UBE2DNL-203ENST00000474922 222 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU7-193P-201ENST00000516723 65 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 AC068339.1-201ENST00000526965 141 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 MIR5009-201ENST00000578736 100 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 AC103810.6-201ENST00000606708 136 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 U1.36-201ENST00000620684 176 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU1-52P-201ENST00000384190 164 ntBASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 SNORA51.10-201ENST00000384418 136 ntBASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU7-67P-201ENST00000459003 62 ntBASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNA5SP281-201ENST00000516504 135 ntBASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 AC004812.1-201ENST00000540773 146 ntBASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 MIR5582-201ENST00000579697 68 ntBASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 MIR3163-201ENST00000581592 73 ntBASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 MIR4679-1-201ENST00000637619 75 ntBASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DQA1Q5Y7H0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU6-457P-201ENST00000363999 107 ntBASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNY4P30-201ENST00000410216 95 ntBASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 AL022718.1-201ENST00000412004 84 ntBASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 POLR2J4-204ENST00000418424 324 ntBASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 SNORD123-201ENST00000459473 70 ntBASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 AC234781.5-201ENST00000508429 271 ntBASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 Y_RNA.694-201ENST00000516677 117 ntBASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 SNORA31.17-201ENST00000516953 127 ntBASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 MIR4672-201ENST00000583126 81 ntBASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 AL513534.2-201ENST00000603836 250 ntBASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 MIR1291-201ENST00000627649 87 ntBASIC2.23□□□□□ -2.05
HLA-DQA1Q5Y7H0 SNORA59A-201ENST00000459326 152 ntBASIC2.22□□□□□ -2.05
HLA-DQA1Q5Y7H0 AC026436.1-201ENST00000510537 270 ntBASIC2.22□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU6-1258P-201ENST00000516911 111 ntBASIC2.22□□□□□ -2.05
HLA-DQA1Q5Y7H0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DQA1Q5Y7H0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DQA1Q5Y7H0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 MIR424-201ENST00000362227 98 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 Y_RNA.171-201ENST00000363760 102 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 Y_RNA.348-201ENST00000365403 103 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-905P-201ENST00000384434 107 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 Y_RNA.531-201ENST00000384589 121 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 SNORA19.1-201ENST00000410656 129 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU2-13P-201ENST00000515909 113 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 MIR4435-1-201ENST00000582552 80 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 FAM106DP-201ENST00000586416 501 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 AP001318.4-201ENST00000616637 121 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 AC087741.2-201ENST00000619415 172 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 AC095038.3-201ENST00000634439 195 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 AP000648.3-201ENST00000623539 4507 ntBASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-1319P-201ENST00000390855 104 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-747P-201ENST00000390928 104 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-241P-201ENST00000391148 104 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-1190P-201ENST00000410811 104 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-177P-201ENST00000411257 104 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 HMGN2P35-201ENST00000412164 270 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 RPS29P29-201ENST00000456396 171 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-109P-201ENST00000516364 107 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-184P-201ENST00000516514 107 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 SNORA31.15-201ENST00000516771 132 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 MIR4529-201ENST00000578110 78 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 MIR4791-201ENST00000607666 84 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 AC243994.1-201ENST00000618627 109 ntBASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DQA1Q5Y7H0 MIR449A-201ENST00000362113 91 ntBASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU4-82P-201ENST00000362443 140 ntBASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-203P-201ENST00000384038 104 ntBASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 MIR590-201ENST00000385008 97 ntBASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-913P-201ENST00000390913 95 ntBASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNA5SP508-201ENST00000411327 119 ntBASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 RPL39P25-201ENST00000449384 154 ntBASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 AC006254.2-201ENST00000603259 279 ntBASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 AC067747.1-201ENST00000608026 250 ntBASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 AL162726.3-218ENST00000636401 95 ntBASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HLA-DQA1Q5Y7H0 MIR6073-201ENST00000352083 89 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-640P-201ENST00000363693 105 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 SNORA24-201ENST00000384096 131 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 SNORA70.7-201ENST00000384159 133 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-1113P-201ENST00000384348 107 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU6-360P-201ENST00000390944 104 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 SNORA26.6-201ENST00000391256 115 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU7-113P-201ENST00000459273 62 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 RPS23P4-201ENST00000487908 423 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 RNU7-53P-201ENST00000516705 60 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 MIR3152-201ENST00000579801 74 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 Y_RNA.773-201ENST00000607168 90 ntBASIC2.18□□□□□ -2.06
HLA-DQA1Q5Y7H0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 489.3 ms