Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 RNU6-450P-201ENST00000364654 107 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 RNU6-102P-201ENST00000384485 104 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 SNORA53-201ENST00000391141 249 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 RNA5SP496-201ENST00000391240 109 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 MIR1827-201ENST00000408549 66 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 RNA5SP95-201ENST00000410319 137 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 MTCO1P5-201ENST00000433573 344 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 RNU4-57P-201ENST00000515980 135 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 MIR548AO-201ENST00000579992 96 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 MIR4636-201ENST00000582271 80 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 AC013791.1-201ENST00000616619 62 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.28-201ENST00000362554 111 ntBASIC0.59□□□□□ -2.31
LRIT3Q3SXY7 RNU6-290P-201ENST00000365212 101 ntBASIC0.59□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.581-201ENST00000391017 97 ntBASIC0.59□□□□□ -2.31
LRIT3Q3SXY7 MIR548O-201ENST00000408583 114 ntBASIC0.59□□□□□ -2.31
LRIT3Q3SXY7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.59□□□□□ -2.31
LRIT3Q3SXY7 AL117351.2-201ENST00000513571 157 ntBASIC0.59□□□□□ -2.31
LRIT3Q3SXY7 RNU7-149P-201ENST00000516739 59 ntBASIC0.59□□□□□ -2.31
LRIT3Q3SXY7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.59□□□□□ -2.31
LRIT3Q3SXY7 uc_338.4-201ENST00000616635 176 ntBASIC0.59□□□□□ -2.31
LRIT3Q3SXY7 AC022140.2-201ENST00000623500 188 ntBASIC0.59□□□□□ -2.31
LRIT3Q3SXY7 SNORA25.1-201ENST00000362326 128 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 Y_RNA.380-201ENST00000365663 111 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 Y_RNA.547-201ENST00000384654 119 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 SNORD105-201ENST00000386910 85 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 MT-TN-201ENST00000387400 73 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 RNU6-383P-201ENST00000410864 94 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 MTND4LP11-201ENST00000422184 280 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 PMCHL1-202ENST00000423102 261 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 MTATP6P23-201ENST00000440153 476 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 RNU7-25P-201ENST00000516544 62 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 RNU2-31P-201ENST00000516954 155 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 AC011195.1-201ENST00000578177 177 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 MIR4724-201ENST00000579485 89 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 AP001094.1-201ENST00000579805 193 ntBASIC0.58□□□□□ -2.32
LRIT3Q3SXY7 Y_RNA.293-201ENST00000364908 93 ntBASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 Y_RNA.460-201ENST00000384255 102 ntBASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 RNU1-119P-201ENST00000391122 165 ntBASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 Y_RNA.631-201ENST00000459607 101 ntBASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 MIR5692C2-201ENST00000577959 77 ntBASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 AL049861.1-201ENST00000603130 150 ntBASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 AL160413.1-201ENST00000622780 310 ntBASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
LRIT3Q3SXY7 MIR377-201ENST00000362145 69 ntBASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 RNU6-1138P-201ENST00000365359 106 ntBASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 RNU6-326P-201ENST00000365480 107 ntBASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 RNU7-67P-201ENST00000459003 62 ntBASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 snoU13.16-201ENST00000459350 104 ntBASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 Y_RNA.637-201ENST00000459424 114 ntBASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 RNU2-13P-201ENST00000515909 113 ntBASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 MIR4662B-201ENST00000579498 81 ntBASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 Z83818.1-201ENST00000603584 150 ntBASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
LRIT3Q3SXY7 RNU6-1272P-201ENST00000362776 107 ntBASIC0.55□□□□□ -2.32
LRIT3Q3SXY7 Y_RNA.241-201ENST00000364470 117 ntBASIC0.55□□□□□ -2.32
LRIT3Q3SXY7 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
LRIT3Q3SXY7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.55□□□□□ -2.32
LRIT3Q3SXY7 BTF3P11-201ENST00000426582 477 ntBASIC0.55□□□□□ -2.32
LRIT3Q3SXY7 snoU13.19-201ENST00000459148 104 ntBASIC0.55□□□□□ -2.32
LRIT3Q3SXY7 RNY3P15-201ENST00000516297 97 ntBASIC0.55□□□□□ -2.32
LRIT3Q3SXY7 MIR4264-201ENST00000583520 66 ntBASIC0.55□□□□□ -2.32
LRIT3Q3SXY7 AL355297.3-201ENST00000604082 446 ntBASIC0.55□□□□□ -2.32
LRIT3Q3SXY7 AL021707.8-201ENST00000609428 183 ntBASIC0.55□□□□□ -2.32
LRIT3Q3SXY7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-34-201ENST00000362441 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-12-201ENST00000362583 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-29-201ENST00000362834 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-9-201ENST00000362912 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-21-201ENST00000362963 81 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-14-201ENST00000363090 81 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-13-201ENST00000363358 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 Y_RNA.128-201ENST00000363391 112 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 Y_RNA.152-201ENST00000363578 100 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-41-201ENST00000363608 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-11-201ENST00000363616 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-5-201ENST00000363633 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-39-201ENST00000363694 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-4-201ENST00000363810 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-16-201ENST00000363887 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-6-201ENST00000363942 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-42-201ENST00000364273 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-15-201ENST00000364809 81 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-1-201ENST00000364961 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-26-201ENST00000365067 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-10-201ENST00000365073 81 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-43-201ENST00000365503 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-36-201ENST00000365629 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 Y_RNA.509-201ENST00000384506 99 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 RNU6-205P-201ENST00000390858 107 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 RNA5SP222-201ENST00000411039 105 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 AC244098.3-201ENST00000424803 96 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 AC087499.4-201ENST00000448505 178 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms