Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 SNORD45.3-201ENST00000363836 72 ntBASIC1.25□□□□□ -2.21
USP41Q3LFD5 Y_RNA.200-201ENST00000364018 102 ntBASIC1.25□□□□□ -2.21
USP41Q3LFD5 SNORA26-201ENST00000391286 122 ntBASIC1.25□□□□□ -2.21
USP41Q3LFD5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.25□□□□□ -2.21
USP41Q3LFD5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.25□□□□□ -2.21
USP41Q3LFD5 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
USP41Q3LFD5 MIR4744-201ENST00000581563 82 ntBASIC1.25□□□□□ -2.21
USP41Q3LFD5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
USP41Q3LFD5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.24□□□□□ -2.21
USP41Q3LFD5 Y_RNA.7-201ENST00000362352 102 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 RNY1-201ENST00000364228 113 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 Y_RNA.634-201ENST00000364811 113 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 RNU6-728P-201ENST00000365375 104 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 RNU6-484P-201ENST00000384016 107 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 SNORD61-201ENST00000384252 73 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 AL121914.1-201ENST00000450188 156 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 Y_RNA.797-201ENST00000515977 94 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 RNU4-57P-201ENST00000515980 135 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 RNU6-504P-201ENST00000516568 104 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 MIR4308-201ENST00000580634 81 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 SNORA4-201ENST00000584302 138 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 AC008133.2-201ENST00000624540 351 ntBASIC1.24□□□□□ -2.21
USP41Q3LFD5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.24□□□□□ -2.21
USP41Q3LFD5 Y_RNA.83-201ENST00000363005 113 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 RNU6-379P-201ENST00000363813 104 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 SNORA1.2-201ENST00000365189 134 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 Y_RNA.370-201ENST00000365589 108 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 SNORD24-201ENST00000383884 75 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 Y_RNA.476-201ENST00000384347 108 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 RNU6-1067P-201ENST00000384752 107 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 RNU6-910P-201ENST00000390844 107 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 SNORA79-201ENST00000408376 140 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 AC245047.7-201ENST00000440265 293 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.23□□□□□ -2.21
USP41Q3LFD5 SNORA31.4-201ENST00000516049 129 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 RNA5SP153-201ENST00000516498 76 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 AC007751.1-201ENST00000529260 376 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USP41Q3LFD5 AC078938.1-201ENST00000620993 318 ntBASIC1.23□□□□□ -2.21
USP41Q3LFD5 SNORA25.3-201ENST00000363205 127 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 Y_RNA.182-201ENST00000363880 111 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 SNORD115-28-201ENST00000363931 81 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 RNU1-93P-201ENST00000364704 169 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 Y_RNA.515-201ENST00000384535 112 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 RNU4-70P-201ENST00000384579 139 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 Y_RNA.571-201ENST00000384753 98 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 MIR518F-201ENST00000384973 87 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 MIR222-201ENST00000384992 110 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 snoU13.25-201ENST00000458945 104 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 snoU13.18-201ENST00000459483 104 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 AL133373.1-201ENST00000497098 94 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 RNU6-388P-201ENST00000517012 105 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 RNU6-389P-201ENST00000517048 105 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 AC109810.1-201ENST00000534066 224 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 AC130289.1-201ENST00000577321 73 ntBASIC1.22□□□□□ -2.21
USP41Q3LFD5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.21□□□□□ -2.22
USP41Q3LFD5 MIR411-201ENST00000362239 96 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 RNU6-888P-201ENST00000363010 101 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 SNORD114-27-201ENST00000363766 70 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 RNA5SP48-201ENST00000363969 126 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 Y_RNA.241-201ENST00000364470 117 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 MT-TG-201ENST00000387429 68 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 RNU6-578P-201ENST00000390980 103 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 RNU6-197P-201ENST00000516680 100 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 SNORA70.22-201ENST00000517160 124 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 AL078603.1-201ENST00000603824 313 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 AC009779.6-201ENST00000603972 165 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 AL022345.2-201ENST00000606307 135 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 MIR4251-201ENST00000635819 61 ntBASIC1.21□□□□□ -2.22
USP41Q3LFD5 Y_RNA.37-201ENST00000362606 108 ntBASIC1.2□□□□□ -2.22
USP41Q3LFD5 Y_RNA.66-201ENST00000362862 102 ntBASIC1.2□□□□□ -2.22
USP41Q3LFD5 SNORA51.10-201ENST00000384418 136 ntBASIC1.2□□□□□ -2.22
USP41Q3LFD5 Y_RNA.552-201ENST00000384665 112 ntBASIC1.2□□□□□ -2.22
USP41Q3LFD5 MIR548A2-201ENST00000384956 97 ntBASIC1.2□□□□□ -2.22
USP41Q3LFD5 AC107297.1-201ENST00000459991 176 ntBASIC1.2□□□□□ -2.22
USP41Q3LFD5 AC108706.1-201ENST00000611053 297 ntBASIC1.2□□□□□ -2.22
USP41Q3LFD5 MIR103A2-201ENST00000362154 78 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 Y_RNA.121-201ENST00000363309 113 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 RNU6-1020P-201ENST00000363684 107 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 RNU6-47P-201ENST00000383866 107 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 RNU6-847P-201ENST00000411115 108 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.19□□□□□ -2.22
USP41Q3LFD5 AC087499.4-201ENST00000448505 178 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 RNA5SP220-201ENST00000516298 104 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 AP000942.4-201ENST00000604811 241 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 MIR4791-201ENST00000607666 84 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 AC141273.2-201ENST00000618989 130 ntBASIC1.19□□□□□ -2.22
USP41Q3LFD5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
USP41Q3LFD5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
USP41Q3LFD5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
USP41Q3LFD5 Y_RNA.23-201ENST00000362496 106 ntBASIC1.18□□□□□ -2.22
USP41Q3LFD5 RNA5SP264-201ENST00000363115 107 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms