Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 RNU6-250P-201ENST00000516958 103 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 SNORA74.3-201ENST00000517108 154 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 MIR3122-201ENST00000577243 73 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 MIR548X2-201ENST00000579776 100 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 AL365434.2-201ENST00000607979 234 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 AC106754.2-201ENST00000623006 233 ntBASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
PTCHD3Q3KNS1 WWP1P1-201ENST00000466609 2769 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 SNORD1A-201ENST00000364968 72 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 RNU6-125P-201ENST00000384505 107 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 SNORA40.5-201ENST00000391061 128 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 SNORA17.3-201ENST00000391159 129 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 RNU1-78P-201ENST00000391248 165 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 MIR513C-201ENST00000401352 84 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 RNU6-938P-201ENST00000411285 103 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 SNORD123-201ENST00000459473 70 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 AC092991.1-201ENST00000477176 376 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 AP003484.1-201ENST00000530974 250 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 AC131055.1-201ENST00000584626 316 ntBASIC1.66□□□□□ -2.14
PTCHD3Q3KNS1 SNORD115-34-201ENST00000362441 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-12-201ENST00000362583 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-29-201ENST00000362834 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-9-201ENST00000362912 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-21-201ENST00000362963 81 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-14-201ENST00000363090 81 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-13-201ENST00000363358 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-41-201ENST00000363608 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-11-201ENST00000363616 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-5-201ENST00000363633 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-39-201ENST00000363694 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-4-201ENST00000363810 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-16-201ENST00000363887 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-6-201ENST00000363942 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-42-201ENST00000364273 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 Y_RNA.251-201ENST00000364551 99 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-15-201ENST00000364809 81 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-1-201ENST00000364961 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-26-201ENST00000365067 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-10-201ENST00000365073 81 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD50.2-201ENST00000365465 70 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-43-201ENST00000365503 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-36-201ENST00000365629 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 Y_RNA.488-201ENST00000384403 102 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 AL451046.2-201ENST00000403074 277 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 HSPE1P24-201ENST00000450782 238 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 AC005908.1-201ENST00000468701 347 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 AC079140.2-201ENST00000506193 142 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 MIR5197-201ENST00000583721 112 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 AP000942.3-201ENST00000603702 160 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 SNORD115-40-201ENST00000606510 82 ntBASIC1.65□□□□□ -2.15
PTCHD3Q3KNS1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.64□□□□□ -2.15
PTCHD3Q3KNS1 MIR934-201ENST00000401241 83 ntBASIC1.64□□□□□ -2.15
PTCHD3Q3KNS1 AC108667.1-201ENST00000428618 249 ntBASIC1.64□□□□□ -2.15
PTCHD3Q3KNS1 SUMO1P3-201ENST00000439961 304 ntBASIC1.64□□□□□ -2.15
PTCHD3Q3KNS1 AL392103.1-201ENST00000447000 198 ntBASIC1.64□□□□□ -2.15
PTCHD3Q3KNS1 RNU7-197P-201ENST00000458836 62 ntBASIC1.64□□□□□ -2.15
PTCHD3Q3KNS1 AC107297.1-201ENST00000459991 176 ntBASIC1.64□□□□□ -2.15
PTCHD3Q3KNS1 RNU7-43P-201ENST00000516554 64 ntBASIC1.64□□□□□ -2.15
PTCHD3Q3KNS1 MIR3683-201ENST00000580847 82 ntBASIC1.64□□□□□ -2.15
PTCHD3Q3KNS1 MIR8063-201ENST00000621930 81 ntBASIC1.64□□□□□ -2.15
PTCHD3Q3KNS1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 Y_RNA.343-201ENST00000365354 112 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 Y_RNA.370-201ENST00000365589 108 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 Y_RNA.497-201ENST00000384447 98 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 SNX2P2-201ENST00000424553 323 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 AC027119.1-201ENST00000440877 241 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 AC245517.4-201ENST00000448601 281 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 SNORA18.7-201ENST00000516910 131 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 MIR4422-201ENST00000581938 83 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 MIR548AR-201ENST00000582191 57 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 MIR3133-201ENST00000583157 78 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 AL357312.1-201ENST00000603879 298 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 MIR502-201ENST00000606349 86 ntBASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.63□□□□□ -2.15
PTCHD3Q3KNS1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PTCHD3Q3KNS1 Y_RNA.440-201ENST00000384120 114 ntBASIC1.62□□□□□ -2.15
PTCHD3Q3KNS1 MIR569-201ENST00000385228 96 ntBASIC1.62□□□□□ -2.15
PTCHD3Q3KNS1 Y_RNA.584-201ENST00000391090 114 ntBASIC1.62□□□□□ -2.15
PTCHD3Q3KNS1 RNU2-13P-201ENST00000515909 113 ntBASIC1.62□□□□□ -2.15
PTCHD3Q3KNS1 SNORD36C-201ENST00000516733 66 ntBASIC1.62□□□□□ -2.15
PTCHD3Q3KNS1 RNU7-181P-201ENST00000517234 74 ntBASIC1.62□□□□□ -2.15
PTCHD3Q3KNS1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.62□□□□□ -2.15
PTCHD3Q3KNS1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.62□□□□□ -2.15
PTCHD3Q3KNS1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.62□□□□□ -2.15
PTCHD3Q3KNS1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
PTCHD3Q3KNS1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.61□□□□□ -2.15
PTCHD3Q3KNS1 Y_RNA.120-201ENST00000363304 110 ntBASIC1.61□□□□□ -2.15
PTCHD3Q3KNS1 RNU6-1336P-201ENST00000383886 109 ntBASIC1.61□□□□□ -2.15
PTCHD3Q3KNS1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.61□□□□□ -2.15
PTCHD3Q3KNS1 RPS26P48-201ENST00000491713 339 ntBASIC1.61□□□□□ -2.15
PTCHD3Q3KNS1 AP001340.1-201ENST00000624405 217 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms