Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC090821.2-201ENST00000523552 176 ntBASIC1.4□□□□□ -2.18
PDS5AQ29RF7 AC090049.2-201ENST00000550377 109 ntBASIC1.4□□□□□ -2.18
PDS5AQ29RF7 AL513534.2-201ENST00000603836 250 ntBASIC1.4□□□□□ -2.18
PDS5AQ29RF7 AC106754.2-201ENST00000623006 233 ntBASIC1.4□□□□□ -2.18
PDS5AQ29RF7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
PDS5AQ29RF7 Y_RNA.91-201ENST00000363042 107 ntBASIC1.4□□□□□ -2.19
PDS5AQ29RF7 RNU6-643P-201ENST00000384018 107 ntBASIC1.4□□□□□ -2.19
PDS5AQ29RF7 Y_RNA.441-201ENST00000384123 112 ntBASIC1.4□□□□□ -2.19
PDS5AQ29RF7 SNORD61-201ENST00000384252 73 ntBASIC1.4□□□□□ -2.19
PDS5AQ29RF7 RNU6-917P-201ENST00000516294 104 ntBASIC1.4□□□□□ -2.19
PDS5AQ29RF7 AC091895.1-201ENST00000624494 256 ntBASIC1.4□□□□□ -2.19
PDS5AQ29RF7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PDS5AQ29RF7 RNU6-888P-201ENST00000363010 101 ntBASIC1.39□□□□□ -2.19
PDS5AQ29RF7 RNU6-886P-201ENST00000384319 105 ntBASIC1.39□□□□□ -2.19
PDS5AQ29RF7 Y_RNA.555-201ENST00000384673 110 ntBASIC1.39□□□□□ -2.19
PDS5AQ29RF7 MIR378D2-201ENST00000580636 98 ntBASIC1.39□□□□□ -2.19
PDS5AQ29RF7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.39□□□□□ -2.19
PDS5AQ29RF7 MIR8063-201ENST00000621930 81 ntBASIC1.39□□□□□ -2.19
PDS5AQ29RF7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.39□□□□□ -2.19
PDS5AQ29RF7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.38□□□□□ -2.19
PDS5AQ29RF7 Y_RNA.547-201ENST00000384654 119 ntBASIC1.38□□□□□ -2.19
PDS5AQ29RF7 AC027119.1-201ENST00000440877 241 ntBASIC1.38□□□□□ -2.19
PDS5AQ29RF7 AC079140.2-201ENST00000506193 142 ntBASIC1.38□□□□□ -2.19
PDS5AQ29RF7 RNU6-693P-201ENST00000516134 107 ntBASIC1.38□□□□□ -2.19
PDS5AQ29RF7 RNU7-121P-201ENST00000516604 62 ntBASIC1.38□□□□□ -2.19
PDS5AQ29RF7 AC007751.1-201ENST00000529260 376 ntBASIC1.38□□□□□ -2.19
PDS5AQ29RF7 MIR4422-201ENST00000581938 83 ntBASIC1.38□□□□□ -2.19
PDS5AQ29RF7 FAM106DP-201ENST00000586416 501 ntBASIC1.38□□□□□ -2.19
PDS5AQ29RF7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.37□□□□□ -2.19
PDS5AQ29RF7 Y_RNA.270-201ENST00000364693 104 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 Y_RNA.357-201ENST00000365487 109 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 MIR548A2-201ENST00000384956 97 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 MIR516B2-201ENST00000385190 85 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 PCNPP3-201ENST00000393579 471 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 MIR548O-201ENST00000408583 114 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 AL591704.2-201ENST00000421658 181 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 SEPT7P4-201ENST00000437076 306 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 AC092991.1-201ENST00000477176 376 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 RNU4-57P-201ENST00000515980 135 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 RNU6-322P-201ENST00000516010 103 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 SNORD116-25-201ENST00000516517 92 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.37□□□□□ -2.19
PDS5AQ29RF7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
PDS5AQ29RF7 Y_RNA.150-201ENST00000363562 102 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 Y_RNA.180-201ENST00000363867 113 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 RNU4-84P-201ENST00000364200 139 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 RNU6-978P-201ENST00000364371 103 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 MIR518F-201ENST00000384973 87 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 RNU6-239P-201ENST00000390990 99 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 RNU6-1135P-201ENST00000411083 103 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 SNX2P2-201ENST00000424553 323 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 AC245517.4-201ENST00000448601 281 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.36□□□□□ -2.19
PDS5AQ29RF7 AC074198.2-201ENST00000508153 258 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 RNU7-25P-201ENST00000516544 62 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 SNORA74.3-201ENST00000517108 154 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 AL365434.2-201ENST00000607979 234 ntBASIC1.36□□□□□ -2.19
PDS5AQ29RF7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
PDS5AQ29RF7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PDS5AQ29RF7 MIR96-201ENST00000362288 78 ntBASIC1.35□□□□□ -2.19
PDS5AQ29RF7 RNU1-93P-201ENST00000364704 169 ntBASIC1.35□□□□□ -2.19
PDS5AQ29RF7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
PDS5AQ29RF7 U8.17-201ENST00000391292 132 ntBASIC1.35□□□□□ -2.19
PDS5AQ29RF7 AL451046.2-201ENST00000403074 277 ntBASIC1.35□□□□□ -2.19
PDS5AQ29RF7 MIR548I3-201ENST00000408378 149 ntBASIC1.35□□□□□ -2.19
PDS5AQ29RF7 MIR548I1-201ENST00000408810 149 ntBASIC1.35□□□□□ -2.19
PDS5AQ29RF7 RNU6-394P-201ENST00000410735 107 ntBASIC1.35□□□□□ -2.19
PDS5AQ29RF7 RNU5E-9P-201ENST00000411164 104 ntBASIC1.35□□□□□ -2.19
PDS5AQ29RF7 AC006461.1-201ENST00000412637 326 ntBASIC1.35□□□□□ -2.19
PDS5AQ29RF7 MIR7111-201ENST00000619751 72 ntBASIC1.35□□□□□ -2.19
PDS5AQ29RF7 AC134878.1-201ENST00000619901 243 ntBASIC1.35□□□□□ -2.19
PDS5AQ29RF7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
PDS5AQ29RF7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.2
PDS5AQ29RF7 SNORD115-28-201ENST00000363931 81 ntBASIC1.34□□□□□ -2.2
PDS5AQ29RF7 Y_RNA.337-201ENST00000365312 102 ntBASIC1.34□□□□□ -2.2
PDS5AQ29RF7 RNU6-597P-201ENST00000365620 102 ntBASIC1.34□□□□□ -2.2
PDS5AQ29RF7 AC087499.4-201ENST00000448505 178 ntBASIC1.34□□□□□ -2.2
PDS5AQ29RF7 SNORD123-201ENST00000459473 70 ntBASIC1.34□□□□□ -2.2
PDS5AQ29RF7 AC107027.2-201ENST00000512197 115 ntBASIC1.34□□□□□ -2.2
PDS5AQ29RF7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.34□□□□□ -2.2
PDS5AQ29RF7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.34□□□□□ -2.2
PDS5AQ29RF7 MIR6767-201ENST00000637302 66 ntBASIC1.34□□□□□ -2.2
PDS5AQ29RF7 Y_RNA.272-201ENST00000364696 102 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 RNU6-1292P-201ENST00000383856 107 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 Y_RNA.410-201ENST00000383992 113 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 SNORA1-201ENST00000384107 130 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 Y_RNA.542-201ENST00000384641 111 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 MIR518E-201ENST00000385252 88 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 SNORD41-201ENST00000386967 70 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 MT-TR-201ENST00000387439 65 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.33□□□□□ -2.2
PDS5AQ29RF7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.33□□□□□ -2.2
PDS5AQ29RF7 SNORA18.7-201ENST00000516910 131 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 RNU6-1270P-201ENST00000517128 108 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 MIR548AR-201ENST00000582191 57 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 AL365205.2-201ENST00000594586 68 ntBASIC1.33□□□□□ -2.2
PDS5AQ29RF7 AC015726.2-201ENST00000620112 122 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms