Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AC009961.2-201ENST00000435771 251 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 AC022137.1-201ENST00000483735 151 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.72□□□□□ -2.68
CPSF1Q10570 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.73□□□□□ -2.69
CPSF1Q10570 RNY1P16-201ENST00000363063 111 ntBASIC-1.73□□□□□ -2.69
CPSF1Q10570 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.73□□□□□ -2.69
CPSF1Q10570 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.73□□□□□ -2.69
CPSF1Q10570 FCF1P4-201ENST00000448326 183 ntBASIC-1.73□□□□□ -2.69
CPSF1Q10570 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.73□□□□□ -2.69
CPSF1Q10570 RNU6-531P-201ENST00000516694 104 ntBASIC-1.73□□□□□ -2.69
CPSF1Q10570 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.73□□□□□ -2.69
CPSF1Q10570 MIR4770-201ENST00000579149 58 ntBASIC-1.73□□□□□ -2.69
CPSF1Q10570 MIR2681-201ENST00000581814 105 ntBASIC-1.73□□□□□ -2.69
CPSF1Q10570 AC245884.10-201ENST00000597355 337 ntBASIC-1.73□□□□□ -2.69
CPSF1Q10570 SNORD113-7-201ENST00000363762 77 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 RNU6-226P-201ENST00000363778 107 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 MIR8485-201ENST00000401372 91 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 AL603914.1-201ENST00000401964 204 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 MIR548O-201ENST00000408583 114 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 RNU2-9P-201ENST00000410194 145 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 AC107027.2-201ENST00000512197 115 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 MIR4473-201ENST00000583731 91 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 AP001542.1-201ENST00000591314 200 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 MIR539-201ENST00000365690 78 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 MIR548I3-201ENST00000408378 149 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.74□□□□□ -2.69
CPSF1Q10570 CHEK2P4-201ENST00000450340 246 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 SNORD22.1-201ENST00000516331 125 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 snoU83B.1-201ENST00000517136 88 ntBASIC-1.74□□□□□ -2.69
CPSF1Q10570 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.74□□□□□ -2.69
CPSF1Q10570 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 AL606923.1-201ENST00000406616 190 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 MTCYBP8-201ENST00000422855 651 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 AP000533.3-201ENST00000447704 118 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.75□□□□□ -2.69
CPSF1Q10570 MTND1P11-201ENST00000456661 876 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 RNU7-187P-201ENST00000458985 68 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 AP000676.1-201ENST00000533307 52 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 MIR4424-201ENST00000585257 86 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 AC092747.3-201ENST00000603769 301 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 AC004467.1-201ENST00000615678 330 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 MIR6129-201ENST00000616087 109 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 MIR6717-201ENST00000622747 73 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 AC091931.1-201ENST00000623488 728 ntBASIC-1.75□□□□□ -2.69
CPSF1Q10570 RNU1-141P-201ENST00000364623 158 ntBASIC-1.76□□□□□ -2.69
CPSF1Q10570 RNU6-636P-201ENST00000384598 107 ntBASIC-1.76□□□□□ -2.69
CPSF1Q10570 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.76□□□□□ -2.69
CPSF1Q10570 MTND3P21-201ENST00000433774 331 ntBASIC-1.76□□□□□ -2.69
CPSF1Q10570 RNU7-74P-201ENST00000459104 62 ntBASIC-1.76□□□□□ -2.69
CPSF1Q10570 ACA59.1-201ENST00000515966 143 ntBASIC-1.76□□□□□ -2.69
CPSF1Q10570 AC245014.2-201ENST00000603689 287 ntBASIC-1.76□□□□□ -2.69
CPSF1Q10570 RNU6-653P-201ENST00000363074 106 ntBASIC-1.77□□□□□ -2.69
CPSF1Q10570 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.77□□□□□ -2.69
CPSF1Q10570 SNORD115-28-201ENST00000363931 81 ntBASIC-1.77□□□□□ -2.69
CPSF1Q10570 RNU6-83P-201ENST00000384568 112 ntBASIC-1.77□□□□□ -2.69
CPSF1Q10570 MIR626-201ENST00000385032 94 ntBASIC-1.77□□□□□ -2.69
CPSF1Q10570 SNORA19.2-201ENST00000516013 114 ntBASIC-1.77□□□□□ -2.69
CPSF1Q10570 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.77□□□□□ -2.69
CPSF1Q10570 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.78□□□□□ -2.69
CPSF1Q10570 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.78□□□□□ -2.69
CPSF1Q10570 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.78□□□□□ -2.69
CPSF1Q10570 SNORA40.9-201ENST00000515895 93 ntBASIC-1.78□□□□□ -2.69
CPSF1Q10570 AC008536.2-201ENST00000607284 349 ntBASIC-1.78□□□□□ -2.69
CPSF1Q10570 AC092954.2-201ENST00000609103 430 ntBASIC-1.78□□□□□ -2.69
CPSF1Q10570 RNU6-282P-201ENST00000365357 103 ntBASIC-1.79□□□□□ -2.7
CPSF1Q10570 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.79□□□□□ -2.7
CPSF1Q10570 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.79□□□□□ -2.7
CPSF1Q10570 AC069503.3-201ENST00000618674 145 ntBASIC-1.79□□□□□ -2.7
CPSF1Q10570 AC132825.6-201ENST00000638861 357 ntBASIC-1.79□□□□□ -2.7
CPSF1Q10570 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.8□□□□□ -2.7
CPSF1Q10570 RNU6-181P-201ENST00000363225 107 ntBASIC-1.8□□□□□ -2.7
CPSF1Q10570 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.8□□□□□ -2.7
CPSF1Q10570 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.8□□□□□ -2.7
CPSF1Q10570 SNORA26.6-201ENST00000391256 115 ntBASIC-1.8□□□□□ -2.7
CPSF1Q10570 RNU6-445P-201ENST00000516949 107 ntBASIC-1.8□□□□□ -2.7
CPSF1Q10570 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.8□□□□□ -2.7
CPSF1Q10570 AL354950.2-201ENST00000617939 290 ntBASIC-1.8□□□□□ -2.7
CPSF1Q10570 RNY4P27-201ENST00000363341 96 ntBASIC-1.81□□□□□ -2.7
CPSF1Q10570 RNU6-996P-201ENST00000365438 107 ntBASIC-1.81□□□□□ -2.7
CPSF1Q10570 RNU6-597P-201ENST00000365620 102 ntBASIC-1.81□□□□□ -2.7
CPSF1Q10570 RNU6-938P-201ENST00000411285 103 ntBASIC-1.81□□□□□ -2.7
CPSF1Q10570 RNU7-55P-201ENST00000459426 62 ntBASIC-1.81□□□□□ -2.7
CPSF1Q10570 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.81□□□□□ -2.7
CPSF1Q10570 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.81□□□□□ -2.7
CPSF1Q10570 AP003357.1-201ENST00000604497 148 ntBASIC-1.81□□□□□ -2.7
CPSF1Q10570 AC022441.3-201ENST00000605737 136 ntBASIC-1.81□□□□□ -2.7
CPSF1Q10570 RNU6-500P-201ENST00000362349 107 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 RNU6-879P-201ENST00000364328 108 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 SNORD74.6-201ENST00000364796 70 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 SNORD24-201ENST00000383884 75 ntBASIC-1.82□□□□□ -2.7
CPSF1Q10570 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms