Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL606923.1-201ENST00000406616 190 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 RNU6-325P-201ENST00000411132 105 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 MTCO3P23-201ENST00000561363 289 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 AC009248.2-201ENST00000619826 254 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 SNORD114-7-201ENST00000362520 77 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.04□□□□□ -2.58
PRKDCP78527 MTND1P27-201ENST00000451117 902 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 AC087752.4-201ENST00000605911 462 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 AC087683.2-201ENST00000611384 326 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 SNORD115-30-201ENST00000364117 82 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 RNU6-268P-201ENST00000364174 107 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.04□□□□□ -2.58
PRKDCP78527 MIR664B-201ENST00000626756 61 ntBASIC-1.04□□□□□ -2.58
PRKDCP78527 RNU4-58P-201ENST00000363192 141 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 SNORD115-7-201ENST00000365306 82 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 AL603914.1-201ENST00000401964 204 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 MTND3P23-201ENST00000431980 347 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 MTATP6P13-201ENST00000438531 667 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 SERF1AP1-201ENST00000514575 187 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.05□□□□□ -2.58
PRKDCP78527 RNU6-468P-201ENST00000384003 109 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 SNORA27-201ENST00000384323 126 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 AC244090.1-201ENST00000441884 93 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.05□□□□□ -2.58
PRKDCP78527 RNU6-449P-201ENST00000383914 107 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 AL354751.2-201ENST00000415471 210 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 RNU6-693P-201ENST00000516134 107 ntBASIC-1.05□□□□□ -2.58
PRKDCP78527 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 RNU5B-4P-201ENST00000363508 111 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 MIRLET7B-201ENST00000385140 83 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 MIR652-201ENST00000385278 98 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 SNORA40.5-201ENST00000391061 128 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 MIR4473-201ENST00000583731 91 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 RNU6-489P-201ENST00000618289 107 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 AL607023.1-201ENST00000620045 248 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 MIR889-201ENST00000401280 79 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.06□□□□□ -2.58
PRKDCP78527 AC069503.3-201ENST00000618674 145 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 SNORD115-27-201ENST00000364430 82 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 RNU2-14P-201ENST00000411053 191 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 MTND3P9-201ENST00000429526 346 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 AL359672.1-201ENST00000442302 409 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 MTATP6P26-201ENST00000445926 662 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 AC091144.1-201ENST00000519573 138 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 AC005828.6-201ENST00000606610 232 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 MIR8055-201ENST00000610739 97 ntBASIC-1.06□□□□□ -2.58
PRKDCP78527 RNU6-973P-201ENST00000364690 107 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 SNORD73A-201ENST00000386062 65 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
PRKDCP78527 RNU6-410P-201ENST00000517006 107 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 SNORD114-4-201ENST00000363962 75 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 SNORA40.2-201ENST00000390847 128 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.07□□□□□ -2.58
PRKDCP78527 AC092954.2-201ENST00000609103 430 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 AL008718.3-201ENST00000610217 321 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 SNORA63.5-201ENST00000363548 123 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 RNY1P11-201ENST00000363759 113 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 SNORD114-17-201ENST00000364699 75 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 RNU7-25P-201ENST00000516544 62 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 AC011603.4-201ENST00000611325 277 ntBASIC-1.07□□□□□ -2.58
PRKDCP78527 RNU6-767P-201ENST00000384132 107 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 RNU6-721P-201ENST00000410155 105 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 YWHAEP3-201ENST00000582767 121 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 RNU6-291P-201ENST00000384720 107 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 AC108729.2-201ENST00000476543 840 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 MIR4775-201ENST00000581168 75 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 AC009878.1-201ENST00000621819 340 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 MIR410-201ENST00000362222 80 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 AL031003.1-201ENST00000404229 172 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 MTCO2P27-201ENST00000420740 428 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 RPS27AP14-201ENST00000422868 454 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.08□□□□□ -2.58
PRKDCP78527 AC007012.1-201ENST00000567192 175 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 RNU6-715P-201ENST00000365204 103 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 RNU4-61P-201ENST00000411243 107 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 AC084290.1-201ENST00000434995 374 ntBASIC-1.08□□□□□ -2.58
PRKDCP78527 AL137161.1-201ENST00000532231 390 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 201 ms