Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 RNU7-149P-201ENST00000516739 59 ntBASIC0.28□□□□□ -2.36
IRX3P78415 AL021707.8-201ENST00000609428 183 ntBASIC0.28□□□□□ -2.36
IRX3P78415 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.36
IRX3P78415 uc_338.16-201ENST00000621804 95 ntBASIC0.28□□□□□ -2.36
IRX3P78415 SNORD45.3-201ENST00000363836 72 ntBASIC0.27□□□□□ -2.37
IRX3P78415 SNORD115-28-201ENST00000363931 81 ntBASIC0.27□□□□□ -2.37
IRX3P78415 RNU6-125P-201ENST00000384505 107 ntBASIC0.27□□□□□ -2.37
IRX3P78415 SNORA26.5-201ENST00000391215 123 ntBASIC0.27□□□□□ -2.37
IRX3P78415 SNORA26-201ENST00000391286 122 ntBASIC0.27□□□□□ -2.37
IRX3P78415 RNU7-56P-201ENST00000458744 62 ntBASIC0.27□□□□□ -2.37
IRX3P78415 RNU7-62P-201ENST00000458856 62 ntBASIC0.27□□□□□ -2.37
IRX3P78415 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.27□□□□□ -2.37
IRX3P78415 MIR3612-201ENST00000579753 87 ntBASIC0.27□□□□□ -2.37
IRX3P78415 AP000942.4-201ENST00000604811 241 ntBASIC0.27□□□□□ -2.37
IRX3P78415 AC013791.1-201ENST00000616619 62 ntBASIC0.27□□□□□ -2.37
IRX3P78415 MIRLET7D-201ENST00000362263 87 ntBASIC0.26□□□□□ -2.37
IRX3P78415 Y_RNA.241-201ENST00000364470 117 ntBASIC0.26□□□□□ -2.37
IRX3P78415 SNORD24-201ENST00000383884 75 ntBASIC0.26□□□□□ -2.37
IRX3P78415 Y_RNA.569-201ENST00000384749 103 ntBASIC0.26□□□□□ -2.37
IRX3P78415 RNU2-14P-201ENST00000411053 191 ntBASIC0.26□□□□□ -2.37
IRX3P78415 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.26□□□□□ -2.37
IRX3P78415 MTND1P14-201ENST00000427400 950 ntBASIC0.26□□□□□ -2.37
IRX3P78415 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.26□□□□□ -2.37
IRX3P78415 RNU6-764P-201ENST00000516396 105 ntBASIC0.26□□□□□ -2.37
IRX3P78415 RNU6-875P-201ENST00000516488 106 ntBASIC0.26□□□□□ -2.37
IRX3P78415 RNU7-25P-201ENST00000516544 62 ntBASIC0.26□□□□□ -2.37
IRX3P78415 Y_RNA.721-201ENST00000517207 102 ntBASIC0.26□□□□□ -2.37
IRX3P78415 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.26□□□□□ -2.37
IRX3P78415 MIR4771-2-201ENST00000577758 74 ntBASIC0.26□□□□□ -2.37
IRX3P78415 MIR4724-201ENST00000579485 89 ntBASIC0.26□□□□□ -2.37
IRX3P78415 MIR4771-1-201ENST00000582617 74 ntBASIC0.26□□□□□ -2.37
IRX3P78415 MIR4676-201ENST00000583078 72 ntBASIC0.26□□□□□ -2.37
IRX3P78415 AC037487.3-201ENST00000606668 112 ntBASIC0.26□□□□□ -2.37
IRX3P78415 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.26□□□□□ -2.37
IRX3P78415 MIR6718-201ENST00000616153 80 ntBASIC0.26□□□□□ -2.37
IRX3P78415 AC090574.1-201ENST00000623186 233 ntBASIC0.26□□□□□ -2.37
IRX3P78415 Z97988.1-201ENST00000637697 135 ntBASIC0.26□□□□□ -2.37
IRX3P78415 MIR367-201ENST00000362299 68 ntBASIC0.25□□□□□ -2.37
IRX3P78415 Y_RNA.80-201ENST00000362996 102 ntBASIC0.25□□□□□ -2.37
IRX3P78415 SNORD113-8-201ENST00000363497 74 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-1099P-201ENST00000363533 107 ntBASIC0.25□□□□□ -2.37
IRX3P78415 Y_RNA.280-201ENST00000364765 112 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
IRX3P78415 Y_RNA.431-201ENST00000384086 102 ntBASIC0.25□□□□□ -2.37
IRX3P78415 MT-TD-201ENST00000387419 68 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-1319P-201ENST00000390855 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-205P-201ENST00000390858 107 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-747P-201ENST00000390928 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 SNORD115-46-201ENST00000390982 71 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-241P-201ENST00000391148 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 SNORD100-201ENST00000408573 76 ntBASIC0.25□□□□□ -2.37
IRX3P78415 MIR1278-201ENST00000408753 81 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-447P-201ENST00000410293 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-1118P-201ENST00000410382 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-1076P-201ENST00000410397 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-355P-201ENST00000410427 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-791P-201ENST00000410467 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-705P-201ENST00000410601 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-1100P-201ENST00000410691 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-860P-201ENST00000410860 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-1217P-201ENST00000411276 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-785P-201ENST00000411324 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.25□□□□□ -2.37
IRX3P78415 LARP7P1-201ENST00000605576 316 ntBASIC0.25□□□□□ -2.37
IRX3P78415 MIR8055-201ENST00000610739 97 ntBASIC0.25□□□□□ -2.37
IRX3P78415 AC006157.1-201ENST00000611750 366 ntBASIC0.25□□□□□ -2.37
IRX3P78415 U6.90-201ENST00000614007 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 MIR376A1-201ENST00000616574 68 ntBASIC0.25□□□□□ -2.37
IRX3P78415 U6.70-201ENST00000620287 104 ntBASIC0.25□□□□□ -2.37
IRX3P78415 AC104985.2-201ENST00000620598 500 ntBASIC0.25□□□□□ -2.37
IRX3P78415 AC092634.7-201ENST00000621022 103 ntBASIC0.25□□□□□ -2.37
IRX3P78415 RNU6-1048P-201ENST00000364054 107 ntBASIC0.24□□□□□ -2.37
IRX3P78415 RNU6-1283P-201ENST00000365314 105 ntBASIC0.24□□□□□ -2.37
IRX3P78415 Y_RNA.390-201ENST00000383932 102 ntBASIC0.24□□□□□ -2.37
IRX3P78415 Y_RNA.395-201ENST00000383945 109 ntBASIC0.24□□□□□ -2.37
IRX3P78415 MIR526A2-201ENST00000390198 65 ntBASIC0.24□□□□□ -2.37
IRX3P78415 RNU6-308P-201ENST00000390957 107 ntBASIC0.24□□□□□ -2.37
IRX3P78415 Y_RNA.587-201ENST00000391210 103 ntBASIC0.24□□□□□ -2.37
IRX3P78415 SNORD77.4-201ENST00000516158 81 ntBASIC0.24□□□□□ -2.37
IRX3P78415 SNORA18.4-201ENST00000516440 124 ntBASIC0.24□□□□□ -2.37
IRX3P78415 MIR5692C2-201ENST00000577959 77 ntBASIC0.24□□□□□ -2.37
IRX3P78415 AC090971.5-201ENST00000621102 293 ntBASIC0.24□□□□□ -2.37
IRX3P78415 RNU6-326P-201ENST00000365480 107 ntBASIC0.23□□□□□ -2.37
IRX3P78415 Y_RNA.418-201ENST00000384029 102 ntBASIC0.23□□□□□ -2.37
IRX3P78415 RNU6-763P-201ENST00000390865 106 ntBASIC0.23□□□□□ -2.37
IRX3P78415 SNORA53-201ENST00000391141 249 ntBASIC0.23□□□□□ -2.37
IRX3P78415 RNU2-55P-201ENST00000411146 174 ntBASIC0.23□□□□□ -2.37
IRX3P78415 SNORD71-201ENST00000411292 86 ntBASIC0.23□□□□□ -2.37
IRX3P78415 SNORD83.1-201ENST00000411362 77 ntBASIC0.23□□□□□ -2.37
IRX3P78415 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.23□□□□□ -2.37
IRX3P78415 MTCO1P5-201ENST00000433573 344 ntBASIC0.23□□□□□ -2.37
IRX3P78415 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.23□□□□□ -2.37
IRX3P78415 MTND5P20-201ENST00000448677 143 ntBASIC0.23□□□□□ -2.37
IRX3P78415 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.23□□□□□ -2.37
IRX3P78415 AC082651.2-201ENST00000496833 166 ntBASIC0.23□□□□□ -2.37
IRX3P78415 AP003327.1-201ENST00000529684 127 ntBASIC0.23□□□□□ -2.37
IRX3P78415 AC090897.1-201ENST00000580909 226 ntBASIC0.23□□□□□ -2.37
IRX3P78415 AL162730.1-201ENST00000605734 292 ntBASIC0.23□□□□□ -2.37
IRX3P78415 Y_RNA.178-201ENST00000363832 102 ntBASIC0.22□□□□□ -2.37
IRX3P78415 Y_RNA.286-201ENST00000364813 102 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms