Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 Y_RNA.488-201ENST00000384403 102 ntBASIC1.56□□□□□ -2.16
RAE1P78406 SNORD41-201ENST00000386967 70 ntBASIC1.56□□□□□ -2.16
RAE1P78406 MIR513C-201ENST00000401352 84 ntBASIC1.56□□□□□ -2.16
RAE1P78406 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.56□□□□□ -2.16
RAE1P78406 AC079140.2-201ENST00000506193 142 ntBASIC1.56□□□□□ -2.16
RAE1P78406 RNU7-43P-201ENST00000516554 64 ntBASIC1.56□□□□□ -2.16
RAE1P78406 RNU6-922P-201ENST00000516753 99 ntBASIC1.56□□□□□ -2.16
RAE1P78406 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
RAE1P78406 MIR3133-201ENST00000583157 78 ntBASIC1.56□□□□□ -2.16
RAE1P78406 AC131055.1-201ENST00000584626 316 ntBASIC1.56□□□□□ -2.16
RAE1P78406 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.56□□□□□ -2.16
RAE1P78406 MIR376A2-201ENST00000636782 80 ntBASIC1.56□□□□□ -2.16
RAE1P78406 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RAE1P78406 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RAE1P78406 MIR569-201ENST00000385228 96 ntBASIC1.55□□□□□ -2.16
RAE1P78406 AL627390.1-201ENST00000396055 340 ntBASIC1.55□□□□□ -2.16
RAE1P78406 MIR934-201ENST00000401241 83 ntBASIC1.55□□□□□ -2.16
RAE1P78406 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
RAE1P78406 AC027119.1-201ENST00000440877 241 ntBASIC1.55□□□□□ -2.16
RAE1P78406 RNU7-197P-201ENST00000458836 62 ntBASIC1.55□□□□□ -2.16
RAE1P78406 snoU13.15-201ENST00000459407 104 ntBASIC1.55□□□□□ -2.16
RAE1P78406 RNU6-295P-201ENST00000516901 104 ntBASIC1.55□□□□□ -2.16
RAE1P78406 AC090821.2-201ENST00000523552 176 ntBASIC1.55□□□□□ -2.16
RAE1P78406 AC104984.5-201ENST00000586878 94 ntBASIC1.55□□□□□ -2.16
RAE1P78406 AL357312.1-201ENST00000603879 298 ntBASIC1.55□□□□□ -2.16
RAE1P78406 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
RAE1P78406 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RAE1P78406 Y_RNA.52-201ENST00000362760 96 ntBASIC1.54□□□□□ -2.16
RAE1P78406 Y_RNA.241-201ENST00000364470 117 ntBASIC1.54□□□□□ -2.16
RAE1P78406 Y_RNA.251-201ENST00000364551 99 ntBASIC1.54□□□□□ -2.16
RAE1P78406 Y_RNA.440-201ENST00000384120 114 ntBASIC1.54□□□□□ -2.16
RAE1P78406 Y_RNA.497-201ENST00000384447 98 ntBASIC1.54□□□□□ -2.16
RAE1P78406 RNU6-1065P-201ENST00000384513 106 ntBASIC1.54□□□□□ -2.16
RAE1P78406 SNORA40.5-201ENST00000391061 128 ntBASIC1.54□□□□□ -2.16
RAE1P78406 CYCSP49-201ENST00000420810 319 ntBASIC1.54□□□□□ -2.16
RAE1P78406 SNX2P2-201ENST00000424553 323 ntBASIC1.54□□□□□ -2.16
RAE1P78406 snoU13.26-201ENST00000459452 105 ntBASIC1.54□□□□□ -2.16
RAE1P78406 SNORA25.12-201ENST00000516202 82 ntBASIC1.54□□□□□ -2.16
RAE1P78406 SNORD111.1-201ENST00000516421 86 ntBASIC1.54□□□□□ -2.16
RAE1P78406 AC019176.1-201ENST00000518519 225 ntBASIC1.54□□□□□ -2.16
RAE1P78406 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.54□□□□□ -2.16
RAE1P78406 MIR3122-201ENST00000577243 73 ntBASIC1.54□□□□□ -2.16
RAE1P78406 MIR4422-201ENST00000581938 83 ntBASIC1.54□□□□□ -2.16
RAE1P78406 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RAE1P78406 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RAE1P78406 RNU6-774P-201ENST00000363238 107 ntBASIC1.53□□□□□ -2.16
RAE1P78406 Y_RNA.343-201ENST00000365354 112 ntBASIC1.53□□□□□ -2.16
RAE1P78406 MIR504-201ENST00000385065 83 ntBASIC1.53□□□□□ -2.16
RAE1P78406 SNORD28B-201ENST00000390993 75 ntBASIC1.53□□□□□ -2.16
RAE1P78406 Y_RNA.584-201ENST00000391090 114 ntBASIC1.53□□□□□ -2.16
RAE1P78406 MIR1289-2-201ENST00000408360 111 ntBASIC1.53□□□□□ -2.16
RAE1P78406 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.53□□□□□ -2.16
RAE1P78406 AC245517.4-201ENST00000448601 281 ntBASIC1.53□□□□□ -2.16
RAE1P78406 AC107297.1-201ENST00000459991 176 ntBASIC1.53□□□□□ -2.16
RAE1P78406 RNA5SP445-201ENST00000515889 115 ntBASIC1.53□□□□□ -2.16
RAE1P78406 RNU6-346P-201ENST00000516288 111 ntBASIC1.53□□□□□ -2.16
RAE1P78406 MIR548AR-201ENST00000582191 57 ntBASIC1.53□□□□□ -2.16
RAE1P78406 GHRLOS.1-201ENST00000610995 70 ntBASIC1.53□□□□□ -2.16
RAE1P78406 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RAE1P78406 MIR6715A-201ENST00000615929 79 ntBASIC1.53□□□□□ -2.16
RAE1P78406 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.53□□□□□ -2.16
RAE1P78406 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
RAE1P78406 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
RAE1P78406 RNY1P11-201ENST00000363759 113 ntBASIC1.52□□□□□ -2.17
RAE1P78406 Y_RNA.370-201ENST00000365589 108 ntBASIC1.52□□□□□ -2.17
RAE1P78406 SNORA70.7-201ENST00000384159 133 ntBASIC1.52□□□□□ -2.17
RAE1P78406 SNORA27-201ENST00000384323 126 ntBASIC1.52□□□□□ -2.17
RAE1P78406 RNU1-78P-201ENST00000391248 165 ntBASIC1.52□□□□□ -2.17
RAE1P78406 RPL30P7-201ENST00000479312 323 ntBASIC1.52□□□□□ -2.17
RAE1P78406 RPS26P48-201ENST00000491713 339 ntBASIC1.52□□□□□ -2.17
RAE1P78406 RNU2-13P-201ENST00000515909 113 ntBASIC1.52□□□□□ -2.17
RAE1P78406 SCARNA15-202ENST00000516881 127 ntBASIC1.52□□□□□ -2.17
RAE1P78406 MIR3937-201ENST00000580135 106 ntBASIC1.52□□□□□ -2.17
RAE1P78406 MIR4764-201ENST00000580680 88 ntBASIC1.52□□□□□ -2.17
RAE1P78406 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.52□□□□□ -2.17
RAE1P78406 Y_RNA.120-201ENST00000363304 110 ntBASIC1.51□□□□□ -2.17
RAE1P78406 SNORD50.2-201ENST00000365465 70 ntBASIC1.51□□□□□ -2.17
RAE1P78406 MIR520C-201ENST00000385005 87 ntBASIC1.51□□□□□ -2.17
RAE1P78406 SNORA26.9-201ENST00000391322 122 ntBASIC1.51□□□□□ -2.17
RAE1P78406 RNU7-96P-201ENST00000459535 64 ntBASIC1.51□□□□□ -2.17
RAE1P78406 RPS29P24-201ENST00000486345 171 ntBASIC1.51□□□□□ -2.17
RAE1P78406 RNU6-426P-201ENST00000516464 97 ntBASIC1.51□□□□□ -2.17
RAE1P78406 RNU6-1149P-201ENST00000516810 97 ntBASIC1.51□□□□□ -2.17
RAE1P78406 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
RAE1P78406 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
RAE1P78406 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.51□□□□□ -2.17
RAE1P78406 AC008133.2-201ENST00000624540 351 ntBASIC1.51□□□□□ -2.17
RAE1P78406 MTND5P32-201ENST00000560711 1802 ntBASIC1.5□□□□□ -2.17
RAE1P78406 SNORA24-201ENST00000384096 131 ntBASIC1.5□□□□□ -2.17
RAE1P78406 Y_RNA.537-201ENST00000384626 109 ntBASIC1.5□□□□□ -2.17
RAE1P78406 Y_RNA.568-201ENST00000384742 113 ntBASIC1.5□□□□□ -2.17
RAE1P78406 RNU6-1067P-201ENST00000384752 107 ntBASIC1.5□□□□□ -2.17
RAE1P78406 MIR3683-201ENST00000580847 82 ntBASIC1.5□□□□□ -2.17
RAE1P78406 MIR4285-201ENST00000581001 85 ntBASIC1.5□□□□□ -2.17
RAE1P78406 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.49□□□□□ -2.17
RAE1P78406 Y_RNA.420-201ENST00000384043 110 ntBASIC1.49□□□□□ -2.17
RAE1P78406 Y_RNA.494-201ENST00000384432 111 ntBASIC1.49□□□□□ -2.17
RAE1P78406 RNU6-460P-201ENST00000391158 108 ntBASIC1.49□□□□□ -2.17
RAE1P78406 RPS27P16-201ENST00000425758 201 ntBASIC1.49□□□□□ -2.17
RAE1P78406 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms