Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 COX6CP6-201ENST00000490840 228 ntBASIC2.27□□□□□ -2.05
NKX3-2P78367 Y_RNA.676-201ENST00000516393 96 ntBASIC2.27□□□□□ -2.05
NKX3-2P78367 RNY4P20-201ENST00000516678 93 ntBASIC2.27□□□□□ -2.05
NKX3-2P78367 RNA5SP437-201ENST00000517249 129 ntBASIC2.27□□□□□ -2.05
NKX3-2P78367 HSPE1P19-201ENST00000603327 295 ntBASIC2.27□□□□□ -2.05
NKX3-2P78367 uc_338.28-201ENST00000612082 187 ntBASIC2.27□□□□□ -2.05
NKX3-2P78367 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NKX3-2P78367 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NKX3-2P78367 AL442644.1-201ENST00000454390 3105 ntBASIC2.26□□□□□ -2.05
NKX3-2P78367 RNU1-17P-201ENST00000363022 152 ntBASIC2.26□□□□□ -2.05
NKX3-2P78367 RNU1-133P-201ENST00000364867 167 ntBASIC2.26□□□□□ -2.05
NKX3-2P78367 MT-TI-201ENST00000387365 69 ntBASIC2.26□□□□□ -2.05
NKX3-2P78367 AL034345.1-201ENST00000407768 123 ntBASIC2.26□□□□□ -2.05
NKX3-2P78367 SNORD23.1-201ENST00000408212 104 ntBASIC2.26□□□□□ -2.05
NKX3-2P78367 RNA5SP501-201ENST00000410990 112 ntBASIC2.26□□□□□ -2.05
NKX3-2P78367 AC015922.2-201ENST00000435593 184 ntBASIC2.26□□□□□ -2.05
NKX3-2P78367 RNU7-70P-201ENST00000516941 66 ntBASIC2.26□□□□□ -2.05
NKX3-2P78367 MIR4679-2-201ENST00000578358 77 ntBASIC2.26□□□□□ -2.05
NKX3-2P78367 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
NKX3-2P78367 MIR342-201ENST00000362212 99 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 MIR450A1-201ENST00000362262 91 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 Y_RNA.116-201ENST00000363292 103 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 SNORA3A-201ENST00000364113 130 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 RNY1P6-201ENST00000384193 109 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 RNU6-1031P-201ENST00000384773 107 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 MIR583-201ENST00000384846 75 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 SNORA48.1-201ENST00000390879 135 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 RNA5SP465-201ENST00000391195 109 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 SNX2P2-201ENST00000424553 323 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 RPL23AP63-201ENST00000498752 471 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 MIR514B-201ENST00000516774 80 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 SUB1P4-201ENST00000566062 339 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.25□□□□□ -2.05
NKX3-2P78367 AC021443.1-201ENST00000604478 211 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 AC091932.4-201ENST00000623386 200 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
NKX3-2P78367 AL596211.1-201ENST00000569873 2277 ntBASIC2.25□□□□□ -2.05
NKX3-2P78367 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NKX3-2P78367 AL596028.1-201ENST00000326971 197 ntBASIC2.24□□□□□ -2.05
NKX3-2P78367 Y_RNA.281-201ENST00000364774 94 ntBASIC2.24□□□□□ -2.05
NKX3-2P78367 RNA5SP89-201ENST00000410300 108 ntBASIC2.24□□□□□ -2.05
NKX3-2P78367 AC093850.1-201ENST00000454121 251 ntBASIC2.24□□□□□ -2.05
NKX3-2P78367 RNU7-12P-201ENST00000516030 62 ntBASIC2.24□□□□□ -2.05
NKX3-2P78367 SNORA31.4-201ENST00000516049 129 ntBASIC2.24□□□□□ -2.05
NKX3-2P78367 RNU7-181P-201ENST00000517234 74 ntBASIC2.24□□□□□ -2.05
NKX3-2P78367 SUMO2P16-201ENST00000519475 264 ntBASIC2.24□□□□□ -2.05
NKX3-2P78367 AC078899.2-201ENST00000595282 212 ntBASIC2.24□□□□□ -2.05
NKX3-2P78367 Y_RNA.783-201ENST00000613546 102 ntBASIC2.24□□□□□ -2.05
NKX3-2P78367 AL035470.1-201ENST00000622571 220 ntBASIC2.24□□□□□ -2.05
NKX3-2P78367 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NKX3-2P78367 RNU6-833P-201ENST00000363486 107 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 RNU6-112P-201ENST00000363599 104 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 Y_RNA.198-201ENST00000364013 98 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 Y_RNA.241-201ENST00000364470 117 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 RNU4-16P-201ENST00000364737 141 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 RNU6-1107P-201ENST00000364817 104 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 RNU6-106P-201ENST00000384405 107 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 RNU6-296P-201ENST00000384608 107 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 SNORD12C-201ENST00000386307 89 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
NKX3-2P78367 RNU2-7P-201ENST00000410794 178 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.23□□□□□ -2.05
NKX3-2P78367 RNU6-168P-201ENST00000516189 101 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 RNU6-830P-201ENST00000516353 107 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 MIR3683-201ENST00000580847 82 ntBASIC2.23□□□□□ -2.05
NKX3-2P78367 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.23□□□□□ -2.05
NKX3-2P78367 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
NKX3-2P78367 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.23□□□□□ -2.05
NKX3-2P78367 Y_RNA.298-201ENST00000364960 107 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 SNORA27-201ENST00000384323 126 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 RNU6-1104P-201ENST00000384723 104 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 MIR520A-201ENST00000384862 85 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 MIR516B2-201ENST00000385190 85 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 U8.17-201ENST00000391292 132 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 RNU6-554P-201ENST00000410466 106 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 RNA5SP270-201ENST00000411361 118 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 RNU7-80P-201ENST00000459562 61 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 AC022523.2-201ENST00000561045 150 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 MIR4498-201ENST00000577599 66 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 MIR4255-201ENST00000579351 72 ntBASIC2.22□□□□□ -2.05
NKX3-2P78367 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.22□□□□□ -2.05
NKX3-2P78367 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NKX3-2P78367 Y_RNA.85-201ENST00000363014 111 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 RNU6-950P-201ENST00000384651 107 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 AL627390.1-201ENST00000396055 340 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 AL031737.1-201ENST00000450125 223 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 RNU7-164P-201ENST00000459221 62 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 RNU7-34P-201ENST00000459394 64 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 RPS27P21-201ENST00000486977 252 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 RNU7-123P-201ENST00000515911 60 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 RNU6-412P-201ENST00000516434 106 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 RNU2-35P-201ENST00000516446 142 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 MIR5089-201ENST00000580047 84 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 AC021506.2-201ENST00000612354 169 ntBASIC2.21□□□□□ -2.06
NKX3-2P78367 SNORA63.5-201ENST00000363548 123 ntBASIC2.2□□□□□ -2.06
NKX3-2P78367 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
NKX3-2P78367 AC099513.1-201ENST00000490423 301 ntBASIC2.2□□□□□ -2.06
NKX3-2P78367 RNA5SP170-201ENST00000517150 101 ntBASIC2.2□□□□□ -2.06
NKX3-2P78367 AC090821.2-201ENST00000523552 176 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms